Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02530 ATGGATAAAGGGTGGGTTTCAGGTGAGGGTTTTGGAGCTTTTGGGGTGATGGGTAGGAGTTGGTTGGTTGGAGTCTTAATTGTGGTGGGGTGTGCCAGCTTGTTGCTGGGTACTGTTGGGGTAGAAGGATATCCAAATGAGGATCTGGTTGTGAAACTCCCTGGCCAACCCAAGGTTGGGTTTAAGCAGTATGCTGGGTATGTTGATGTAGATGTCAAGCATGGAAGGAGCTTGTTCTACTATTTTGTGGAAGCTGAGCAAGAACCTGAAAAGAAGCCCCTCACACTTTGGCTCAATGGAGGTCCCGGTTGTTCCTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCTTTTTATCCTAAAGGTGATGGACGTGGTCTCCGAAGAAATTCCAAGTCTTGGAATAAAGCATCCAACCTACTTTTCGTTGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTATAACACTGGAGATGCATCCACTGCCAATGATATGTATTCCTTCATGCTTAAATGGTATCAGAAGTTTCCAACATATAGATCAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACACTACATACCGCAGTTAACTAATGTTCTACTGGACCACAATGCTCGTTCAACTGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTGATCGGGATGCACCTGCCACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCCATCATGAATAATTGTGACTTTGATGATTATGCCTATGCAACTCCTCACAACGTTTCTGATTCATGCAACAATGCCATGTATGAAGCAAATCTCATTGTTGGTGATTATATAAACAATTATGATGTAATTTTGGATATTTGTTATCCATCTATAGTGGAACAAGAACTCAGATTGAAAAAGATGGCTACTAAAATAAGTGTAGGTATAGATGTCTGTATGACTTTTGAAAGACGTTTCTACTTCAACCTTCCTGACGTTCAGAAGGCTCTCCATGCAAACCGGACTAATCTTCCTTATAGCTGGTCCATGTGTAGTCGGTATTGCAGTGTTCTAAACTATAGCGACACTGATGGTAACATCAATATCCTACCAATTCTCAAAAGGATAGTCCAAAATCATATCCCAGTATGGATTTTCAGTGGAGACCAAGATTCTGTTGTGCCGTTATTGGGATCTCGAACACTAATTCGTGAATTAGCTCATGAATTACAATTCAAGATTACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGGGGAGCTGCTCATATGGTACCTTATGCACAACCTTCAAGAGCACTGCATCTATTCAGTTCATTTGTTCGTGGAAGGAGGTTGCCAAATGCAACACATCCTTCAATTGATGAATAA 1482 0.4157 MDKGWVSGEGFGAFGVMGRSWLVGVLIVVGCASLLLGTVGVEGYPNEDLVVKLPGQPKVGFKQYAGYVDVDVKHGRSLFYYFVEAEQEPEKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSKSWNKASNLLFVESPAGVGWSYSNTTSDYNTGDASTANDMYSFMLKWYQKFPTYRSRELFLTGESYAGHYIPQLTNVLLDHNARSTGFKFNIKGVAIGNPLLKLDRDAPATYEYFWSHGMISDEIGLAIMNNCDFDDYAYATPHNVSDSCNNAMYEANLIVGDYINNYDVILDICYPSIVEQELRLKKMATKISVGIDVCMTFERRFYFNLPDVQKALHANRTNLPYSWSMCSRYCSVLNYSDTDGNINILPILKRIVQNHIPVWIFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNATHPSIDE. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02530 493 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Seca7g02530 493 Gene3D alpha/beta hydrolase 45 307 IPR029058 -
Seca7g02530 493 FunFam Carboxypeptidase 44 308 - -
Seca7g02530 493 Pfam Serine carboxypeptidase 55 480 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 ProSitePatterns Serine carboxypeptidases, serine active site. 192 199 IPR018202 GO:0004185
Seca7g02530 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 467 IPR001563 GO:0004185|GO:0006508
Seca7g02530 493 Gene3D - 381 480 - -
Seca7g02530 493 FunFam Carboxypeptidase 381 480 - -
Seca7g02530 493 Gene3D - 331 366 - -
Seca7g02530 493 SUPERFAMILY alpha/beta-Hydrolases 51 483 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02530 Seca-Chr7 62990344 62995693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02530 337 483 Calmodulin-binding Proteins AT2G22960 26.531 1.35e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02530 K16297 - gmx:100801752 912.909