Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02524 ATGAACAGAGGCGGTCACGCTGCTGGAAGACGCGAGATGGGCGGTGCTGCGGGTCTAGCGGCGCAAGCGAGAGGGCGGCGGTCGGACAAGACGACAAGACGACTTGCTGGACGCGCCGCGAAATGGAGAACAAATTATCGAAGTTCTTGGTCATTTTCAGTCACAATAAGCTTGAAGAGAAAAAAAGGTATTTTACAGGAGAGCAAATTCTTGAAGTTCTTGGGGTGTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTACTGCTATAATGGCAATTGCACTTGCCAATGGAGGGCGGAAGCCTTCTGACTGGCAAGATTTTGTGGGTATCATCACCGATCTTATCATCAATTCAACTATTAGTTTCATTGAGGAGAACAATGTCGGTAATGCTGCAGCAGCTCTCATGGCTCGTCTTGCTCCAAAAGCAAAAAGAGGTCTTTTAGATTTAAAGCAGATAAATAGACTTCTTTTACTTCTCATTCTCTTTACCCCTGGATTTCCCAATGCATGA 516 0.4632 MNRGGHAAGRREMGGAAGLAAQARGRRSDKTTRRLAGRAAKWRTNYRSSWSFSVTISLKRKKGILQESKFLKFLGCMWNPLSWVMEATAIMAIALANGGRKPSDWQDFVGIITDLIINSTISFIEENNVGNAAAALMARLAPKAKRGLLDLKQINRLLLLLILFTPGFPNA. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02524 171 MobiDBLite consensus disorder prediction 1 34 - -
Seca7g02524 171 PANTHER CALCIUM-TRANSPORTING ATPASE 66 145 - -
Seca7g02524 171 SUPERFAMILY Calcium ATPase, transmembrane domain M 67 144 IPR023298 -
Seca7g02524 171 Gene3D - 76 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02524 Seca-Chr7 62844032 62848038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02524 67 145 Primary Pumps ATPases AT2G07560 83.544 1.50e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02524 K01535 - zof:122046191 140.584