Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02509 ATGTCTAGCACAGTTGGCAAGGTCATCAAGTGCAGAGCTGCTGTTTCATGGGAGGCAGGGAAGCCACTAGTGATTGAAGAAGTAGAGGTGGCACCACCCCAAGCTGGTGAAGTGCGTTTGAAGATCCTCTTCACCTCTCTTTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCAGTGTTTCCTCGTATTTTTGGCCATGAAGCTGCAGGGGTTGTTGAGAGCGTAGGCGAGGGTGTGACTCATCTGAAACCAGGAGACCATGCCCTCCCTGTATTCACAGGGGAGTGTGGGGAGTGCCCACACTGTAAATCAGAAGAGAGCAACTTGTGTGACCTGCTCAGGATCAACACTGATAGGGGTGTCATGATCAATGATGGCCACTCAAGGTTCTCTAAGAATGGAAAGCCCATATACCATTTCTTGGGAACCTCTACATTTAGTGAATACACTGTTCTCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGGATTTGCACAGGTCTTGGGGCTACTGTAAATGTAGCAAAACCAAAACCTGGTTCCTCTGTTGCAATTTTTGGACTTGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCTTCAAGAATCATTGGAGTTGACTTAGTTTCCAGCCGATTTGAACTAGCTAAAAAGTTTGGGGTTAATGAGTTTGTCAACCCAAAAGATCATGACAAACCTGTACAACAGGTGATTGCTGAAATGACCAATGGAGGTGTGGATCGTGCTGTTGAATGTACTGGCAGCATCCAGGCCATGATCTCAGCATTTGAATGTGTCCATGATGGTTGGGGTGTTGCTGTACTTGTTGGTGTTCCAAGTAAAGATGATGCATTCAAAACAGCTCCTATTAATTTCCTGAATGAGAGGACTCTTAAGGGTACCTTTTATGGTAATTACAAACCACGCACTGATCTTCCATCTGTTGTGGAGAAGTACATGAAAGGGGTAAGCATCATATATACTGAATTGTGTGGTCTCTTAGGAGAATCAATATTGGAAGAAGCTTATTTTTTCATGTTGCTAATATGA 1110 0.4523 MSSTVGKVIKCRAAVSWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAAGVVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNLCDLLRINTDRGVMINDGHSRFSKNGKPIYHFLGTSTFSEYTVLHAGCVAKINPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTAPINFLNERTLKGTFYGNYKPRTDLPSVVEKYMKGVSIIYTELCGLLGESILEEAYFFMLLI. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02509 369 SUPERFAMILY GroES-like 4 187 IPR011032 -
Seca7g02509 369 Gene3D - 19 342 - -
Seca7g02509 369 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Seca7g02509 369 Gene3D - 183 321 - -
Seca7g02509 369 FunFam Alcohol dehydrogenase class-P 183 321 - -
Seca7g02509 369 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Seca7g02509 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Seca7g02509 369 PANTHER ALCOHOL DEHYDROGENASE 6 342 - -
Seca7g02509 369 CDD alcohol_DH_plants 9 342 - -
Seca7g02509 369 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Seca7g02509 369 Pfam Zinc-binding dehydrogenase 206 331 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02509 Seca-Chr7 61870110 61873316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02509 37 339 Monolignol Biosynthesis Gene Families AT4G37990 24.918 1.26e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02509 K18857 - gmx:100800668 654.44