Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02476 ATGGAGCACAATGAATGTCAACCACTTGAAGTTTATGAGCATAAAGATATTTTTCTTGGCCAAGTTGTTTATAGCAAAGATGGAGCTTATACCTTGTACCAAGAACATGCATTCAAAATGGGTTTTAGTTTGAGAAGACGGAGGGAGTTGTATTATGATATTGAGAAAAAAGAACAAGGGTTTAAGAACAATGAACCTGTAGGTGAAGTGACTTATGAAAGAGCGGATTCAAGAACAAATTGCACAACTATGGTGAGATTTAATGTGAATAAGGATGGAGTATGGAAATTTACAAAGTTAGAACTGAATCATAACCATGACTTTGTGCCACCAGAGCAAAGATATTTGCTACATTTTATGAGAAGCATGTCAAATGCCAAAGGAGAACTCATTAATTCCATGGTGAATGCAGGTATGAAAGTTACAAATATTTGGAGTTATTTGGGGGAAGAGGTTGGTGGATTTGATAATCTTGGTATTACGATGAAAGATATGCATAATTATGTCTACTCTGAAAAGTTGAAATTAATTGATGTCGGTGATGCTCAGGCTTTAGTGAACCACTTTTAA 570 0.3509 MEHNECQPLEVYEHKDIFLGQVVYSKDGAYTLYQEHAFKMGFSLRRRRELYYDIEKKEQGFKNNEPVGEVTYERADSRTNCTTMVRFNVNKDGVWKFTKLELNHNHDFVPPEQRYLLHFMRSMSNAKGELINSMVNAGMKVTNIWSYLGEEVGGFDNLGITMKDMHNYVYSEKLKLIDVGDAQALVNHF. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02476 189 Pfam FAR1 DNA-binding domain 32 110 IPR004330 -
Seca7g02476 189 PANTHER OS01G0519700 PROTEIN 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02476 Seca-Chr7 60506257 60506857 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g02476 FAR1 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02476 - - tpra:123905334 283.878