Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02461 ATGGAGAACCCTGCTCCCCCTTCTTATGTCATAATTGCGTGTGATGCGACGAAAGATCGCAATGAGAATGAGATCAAGCTTGTTGTTGATCACCTTCGAAGCAAGGGTGGCATTCTTTCTGCAGGGGACAACTTGCTTGTGCTCGGTGTCTTGCATAAGGTGCCTCACCCAATGGGATACCAGACATTACCATGCCCGGAGTCCTTTTCTGGCACGAACATTCGTGCAATGGAGGAAGTAGTTAACCAGAAAGTTGATGCATATATAAGTGTACTTCTGCCAAGTTATGAAGAATGTGAAAATAAAGGGGTTAGCATCGAAGTTAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTGTACAAGAGGTTACAAACTACAATGCATCTTGGGTTATTCTTGATAGGCATCTTCGGCGTGACTTGAGATTCTACAAGAACAAGATATCATGTAGGGTTGCGTTGGTTAAAGATGACTTGTCGGTGGATATTTGGAGATCTCATCATATAAATGAAACAGATGTCACAGAACAAAAGCTTATCTATTCTTTGTCAAAGTGTGTTTCACTATCAGATTGCCATAGTAATGAAGATGTGGAGCAATCTGTTACCTTTTCCAAAAGTTGTCCCTTTTCCATAACTTCTTCTGACAGCTCCAGTTTGTTTAAGAGCAGCACAAAACATTCTAATGCTAACAGGAAAGAGGAGCTTAGTTCTTCAACAGATTTTGGGTCTTCTTCAGGCATAAGCAGCAAAGCAGAATATAAGCATCCCATTACTTCTCATATTTTCCAAAGGCAAAACAAATATGGCTTTCTATCAAATTCTTCTGATGCTCCAATTCTCTGTGCTGGTTGTGGGACAAGGACTGAATTATATACTACGGAGTTAACGAGGTTCAGTTATTCTGATATACAACTTGCAACAGATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCACGTCTATAAGGGCACGCTTAAAGATGGACAACAAATAGCTGCGAAGGTAAGGAAAGAAGAAAGCACACAAGGATTCTCTGAATTCCATTCTGAGGTTTACGTCTTGAGTTTTGCTAGACATAAGAATATAGTGATGCTTTTGGGCTACTATAGCAAAGAAAGGCTAAATATATTGGTATATGAATATATTTGCAATAAGTCTCTTGAGTGGCATTTATTCGATAAAAATGCAGAAGTTCTCCCGTGGCACCAAAGATATGCTATTGCTATTGGAACCGCAAAAGGATTGCGTTTTTTACACGAGGAATGTCGTGGAGGTCCTATTATTCATCGAGACATGAGACCAAGCAATATACTGCTCACGCATGATTTTGTTCCCATGGTAAAATATGCTTCATTCTCTTTCGGTAGTTGA 1389 0.396 MENPAPPSYVIIACDATKDRNENEIKLVVDHLRSKGGILSAGDNLLVLGVLHKVPHPMGYQTLPCPESFSGTNIRAMEEVVNQKVDAYISVLLPSYEECENKGVSIEVKVTAGFPIRQVIVQEVTNYNASWVILDRHLRRDLRFYKNKISCRVALVKDDLSVDIWRSHHINETDVTEQKLIYSLSKCVSLSDCHSNEDVEQSVTFSKSCPFSITSSDSSSLFKSSTKHSNANRKEELSSSTDFGSSSGISSKAEYKHPITSHIFQRQNKYGFLSNSSDAPILCAGCGTRTELYTTELTRFSYSDIQLATDDFSKDNLLGEGGYGHVYKGTLKDGQQIAAKVRKEESTQGFSEFHSEVYVLSFARHKNIVMLLGYYSKERLNILVYEYICNKSLEWHLFDKNAEVLPWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMVKYASFSFGS. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02461 462 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 284 387 - -
Seca7g02461 462 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Seca7g02461 462 Gene3D Phosphorylase Kinase; domain 1 286 387 - -
Seca7g02461 462 SUPERFAMILY Protein kinase-like (PK-like) 292 452 IPR011009 -
Seca7g02461 462 Pfam Protein tyrosine and serine/threonine kinase 315 449 IPR001245 GO:0004672|GO:0006468
Seca7g02461 462 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 274 451 - -
Seca7g02461 462 ProSiteProfiles Protein kinase domain profile. 312 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02461 462 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Seca7g02461 462 Gene3D Transferase(Phosphotransferase) domain 1 389 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02461 Seca-Chr7 60117135 60135415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02461 230 449 Trihelix Transcription Factor Family AT1G23540 38.636 4.60e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca7g02461 PK_Tyr_Ser-Thr 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02461 - - vun:114163670 649.818