Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02437 ATGGATGCAAGCCAAATCGAGCAATTCATTAATGAGGTGGTTGTTCTATCCCAAATTAATCATAAGAATGTGGTCAAACTCTTGGGATGTTGTTTAGAGACAGTAGTTCCTTTACTGGTTTATGAATTTGTTAGCAATGAGCTGCTAACAGGGGAGAAACCTCTTTCTTTCGATAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGTTTGAAAGAGGATAGCATGTTTGATGTTCTTCAAGTTGGCATCTTGTGTGAAGAAAATAAGCTGGTGATCAAGGAGTTTGCTATTCTTGCTGCAAAGTGCTTGAGACTTAAAGTGGAGGAAAGGCCTAGCACGAAGGAAGGGGCTATGGAGTTGGAGGGAATAAGGCTAATTGAGAAGCACCCTTGGATCAATCGAGACATAAATATAGAGGAGAACCGATACCTGCTTCATGAGGCATAA 459 0.4096 MDASQIEQFINEVVVLSQINHKNVVKLLGCCLETVVPLLVYEFVSNELLTGEKPLSFDRPEEKRSLAMHFLSCLKEDSMFDVLQVGILCEENKLVIKEFAILAAKCLRLKVEERPSTKEGAMELEGIRLIEKHPWINRDINIEENRYLLHEA. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02437 152 Pfam Protein tyrosine and serine/threonine kinase 3 47 IPR001245 GO:0004672|GO:0006468
Seca7g02437 152 Gene3D Transferase(Phosphotransferase) domain 1 44 144 - -
Seca7g02437 152 FunFam Protein kinase superfamily protein 1 47 - -
Seca7g02437 152 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 46 IPR045274 GO:0007166
Seca7g02437 152 SUPERFAMILY Protein kinase-like (PK-like) 4 49 IPR011009 -
Seca7g02437 152 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02437 Seca-Chr7 59338805 59339603 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02437 2 49 Receptor kinase-like Gene Family AT1G21250 81.250 3.87e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02437 PK_Tyr_Ser-Thr 1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02437 - - tpra:123893723 166.777