Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02435 ATGAAACTGAATATGACGCTCATGCAACTGGGCTGGGTGCTAACCGTCGCATTAGCAGCAGTTACAGCTAATCAAACTTTTACATTAGCAGAAACACCAAAACAAACCCTCCCTGGCTGCAATTCCACTTGTGGAAACATTGAAATTCCATATCCATTCGGCATAGGCCTATCATCTACACCAAATCAACAACCCTGTTCCTTAGCGCCCAAATTTAATCTCATTTGTGTAAACGACTCCCAATTATTATGGGGCAACGTAACAATTTTACATATAGGCATCCAAGGTCAAGTCGACGTGTCGTTTTTCGTCGCATCGGTTTGCGACGGCGACAATCGCCCCTGGCTCGACACTGCTAGTTTCAGCATCTCAAGCAAGGAAAACAAATTCATAACCGTTGGCTGTGACAGTTTCGGTGTTCTCAACAGCAATTACAACGAGGAAACGTATTCAACGGGGTGCTTAACGAGATGTTATGGCAATAGAATGAGTATTGAAAATGGAACGTGTTCGGGTATAGGGTGTTGCCAGGTGGATATTCCTCCTAGAATGAGGAATATTAGTTTACTAGCATCTGAGTTCTCTAATTCAACGGAATCTTTGGAAACCTGCACTTATTCCTTTGTTGCTAAACAAGGTTTTTATAATTTTTCTACTTCTCATTTACGACGCTTGCCTTACAAGAAATTCCCCTTGGTTCTTGATTGGACCGTGGGAGACCAAAATTGTAGTGCTTCGGAGAGTGGAGTCGACTATGCCTGTAAGAACAATAGCTATTGCTATGACAAGGACACTGACTATGGCTATCGATGCAGATGTAAGCCAGGTTATGAAGGAAACCCATACCACCCGGATGGTTGCAATGATATTGATGAATGTAAGACAACGAATCATACATGCATAGATGAAAATCATTGTCGCAACACCGATGGATCTTACCAATGTTTCTGTCCACATGGACAATCCGGAAATGGAACAAAAGAAGGAGGGTGCCACCGGAAAGATGTACTTACCAAGGTTGTCATTGGAGCATGTGCAGGATTTTTGGCTCTATTTGCAGGGGCTTCCTCATTGTACATAATACACCAGAAAAGGAAACTAAAAAAACTAAAAGAGAAATTCTTTCAGCAAAATGGCGGTGTCATGTTACTACAACAACTCTCTACAAGGGAAAACGCCTCTCAAACTGCTCAAATATTCACCGAAGATCAACTAAAGAAGGCTACCAACAACTATGATGAAAGCTTAATCATTGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGATTTCTACCAGATAACAGAATTGTTGCTATCAAGAAGTCCAAAATAATGGATGCAAGCCAAATCGAGCAATTCATTAATGAGGTGGTTGTTCTGTCCCAAATAAATCATAGGAATGTGGTCAAACTCTTGGGATGTTGTTTAGAGACAGAAGTTCCTTTACTGGTTTATGAATTTGTTAGCAATGGTACCCTTTATGATTTTATACACACTAAAAGCAAGGTAAATAATGTAACATGGACAACTCGTCTAAGGATAGCAGCAGAGACAGCAGGATCTCTATCATATCTACATTCAGCTGCCTCAATACCCATTATCCACAGAGATGTCAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTAGTTCCAATTGATCAAACTGACATAGCCACAATGGTGCAGGGAACAATTGGCTACTTAGATCCAGAGTATATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTGTATAGCTTTGGAGTAGTGCTTGTGGAGTTGCTAACAGGGGAGAAACCTCTTTCTTTTGATAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTTTCTTGCTTGAAAGAGGATCGCATGTTTGATGTTCTTCAAGTTGGCATCTTGTGTGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCTGGAAAGTGCTTGAGACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATAAGGCTAATTGAGAAGCACCCTTGGATCAATCGAGACATAAATCTAGAGGAGAATCGATACTTGCTTCATGAGGCATCATCTAGCAATTGTGAACCAGAGGATAGTAGAAACTATGGATATTCTGGGTATGATAGCTTGAGAGATCATGTACTAATTGCCTTTGATGGTGGAAGATAA 2232 0.4108 MKLNMTLMQLGWVLTVALAAVTANQTFTLAETPKQTLPGCNSTCGNIEIPYPFGIGLSSTPNQQPCSLAPKFNLICVNDSQLLWGNVTILHIGIQGQVDVSFFVASVCDGDNRPWLDTASFSISSKENKFITVGCDSFGVLNSNYNEETYSTGCLTRCYGNRMSIENGTCSGIGCCQVDIPPRMRNISLLASEFSNSTESLETCTYSFVAKQGFYNFSTSHLRRLPYKKFPLVLDWTVGDQNCSASESGVDYACKNNSYCYDKDTDYGYRCRCKPGYEGNPYHPDGCNDIDECKTTNHTCIDENHCRNTDGSYQCFCPHGQSGNGTKEGGCHRKDVLTKVVIGACAGFLALFAGASSLYIIHQKRKLKKLKEKFFQQNGGVMLLQQLSTRENASQTAQIFTEDQLKKATNNYDESLIIGKGGYGTVFKGFLPDNRIVAIKKSKIMDASQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLYDFIHTKSKVNNVTWTTRLRIAAETAGSLSYLHSAASIPIIHRDVKSANILLDDTYTAKVSDFGASRLVPIDQTDIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPLSFDRPEEKRSLAMHFLSCLKEDRMFDVLQVGILCEENKQEIKEVAILAGKCLRLKGEERPSMKEVAMELEGIRLIEKHPWINRDINLEENRYLLHEASSSNCEPEDSRNYGYSGYDSLRDHVLIAFDGGR. 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02435 743 SUPERFAMILY EGF/Laminin 287 324 - -
Seca7g02435 743 Gene3D Transferase(Phosphotransferase) domain 1 488 701 - -
Seca7g02435 743 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 695 IPR045274 GO:0007166
Seca7g02435 743 Pfam Protein kinase domain 414 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02435 743 FunFam Wall-associated receptor kinase 2 382 487 - -
Seca7g02435 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Seca7g02435 743 SMART serkin_6 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02435 743 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Seca7g02435 743 Gene3D Laminin 240 331 - -
Seca7g02435 743 FunFam Fibrillin 2 284 328 - -
Seca7g02435 743 SMART egf_5 292 332 IPR000742 -
Seca7g02435 743 SMART egf_5 242 288 IPR000742 -
Seca7g02435 743 SMART egfca_6 289 332 IPR001881 GO:0005509
Seca7g02435 743 SMART egfca_6 240 288 IPR001881 GO:0005509
Seca7g02435 743 SUPERFAMILY Protein kinase-like (PK-like) 393 683 IPR011009 -
Seca7g02435 743 CDD STKc_IRAK 418 685 - -
Seca7g02435 743 ProSiteProfiles Protein kinase domain profile. 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02435 743 Pfam Wall-associated receptor kinase galacturonan-binding 40 97 IPR025287 GO:0030247
Seca7g02435 743 ProSiteProfiles EGF-like domain profile. 289 327 IPR000742 -
Seca7g02435 743 Pfam Calcium-binding EGF domain 289 331 IPR001881 GO:0005509
Seca7g02435 743 FunFam Wall-associated receptor kinase 2 488 705 - -
Seca7g02435 743 Pfam Wall-associated kinase 168 274 IPR013695 GO:0004674|GO:0016020
Seca7g02435 743 ProSitePatterns Calcium-binding EGF-like domain signature. 289 315 IPR018097 GO:0005509
Seca7g02435 743 CDD EGF 254 282 - -
Seca7g02435 743 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Seca7g02435 743 CDD EGF_CA 289 323 - -
Seca7g02435 743 Gene3D Phosphorylase Kinase; domain 1 378 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02435 Seca-Chr7 59219480 59222498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02435 40 743 Receptor kinase-like Gene Family AT1G21230 45.667 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02435 Pkinase 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02435 - - gmx:100781051 1054.28