Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02433 ATGGAAAAGGCAAAGAACACGCAGCTTTGCCGTGTTTTATTGGTTGCATTAGCGCTGCAGGTAGTAGCAGTTGCAGCCGCAGCACCAAAACAAACCCTCCCTGGTTGCAATTACACTTGTGGAGATGTCAAAATTCCATATCCATTTGGCACAGGCAAATCATCTACACCAGAGCAACGACCCAGTTCATTTGAACCCAAATTTAATCTCACTTGTGTAAACAACTCCCAATTATTATTGGGTAACGTACAAGTTTTACACATCGACGTCATCCAAGGTCAAATGGATGTTTTGTTTAACATCTCATGGCATTGCTATCTGCGAAATGGAAGTGGATATCACAGCTACCCTTGGCTGCAAACTGGTGCTTTCAGCATTTCTAGCAAGGAAAACAAGTTCCTAACTGTTGGCTGCGACAGTTTCGGCTATCTCAACAGCGCTTTCGACGGGGAGTTATATTCAACAGGGTGCTTGACAAGATGTTATGGGAATAGAATGATCGTTAACGGAACGTGTTCGGGCATAGGATGTTGCCAGGTGGATATTCCTCTTAGAATGAGGAATATTAGTGTACAAGCTTCTGGCTTCAATTTAACAGAATCTCTAGGAACCTGCAGCTATTCCTTTGTTGTTAAAGAAGGAAACTATACTTTTAATTCCAGTGATTTGCAAGATTTTCCTTACACGGAATTCCCTTTGGTTCTTGATTGGAGCGTAGGAGACAAAAAATGCAGTGCTTCAAAAGGTGAAGTCGACTATGCCTGCAGGAACAATAGCCACTGCGTTGACAAGGACACTGATATTGGTTACCGATGCTTATGCAATCCAGGTTATGATGGGAACCCCTACCATCCGGATGGCTGTTTAGACGTCAATGAATGTACAACATCAAATCATACATGCCTAGACGGAAATCATTGTCTCAACACCGATGGGTCTTACAGATGCTTTTGTCCTAAGGGGCAATCCGGCGATGGAACAAAGGCAGGAGGGTGCCATCGGCGTGAACCTACCAAGATTATTATCGGTACGCAACTAAGCACATCCAATTTTATTTCATTTAAATTTAAATTTTTTAACTTCTTCTTTCTTGCATATGTATATGTTCGTACAATATATATGTATGCTAATATGTTATTGTTTAGTTCATTGAAAAATTCAAGAATTGGCCAATTGGAACAACTCCGTACAAGAGAAGATTCCTCCCAAATTACTCAAATATTCACACAAGATGAGCTTAAGAAGGCCACCAACAACTATGATGAGAACTTAATCATTGGTAGAGGAGGTTATGGTACAGTTTTCAAAGGAATTCTGTCACATAAACGAATTGTTGCTGTCAAAAAATCCAAAATAGTAGATAAGAGTCAAATTGAGCAATTCATTAATGAGGTAGTTGTTGTATCACAAATCAATCATAGGAACGTGGTCAAACTGATAGGATGTTGCCTAGAGACAGAAATTCCTTTACTGGTTTATGAATTTGTTAGCAATGGTACCCTTTATAATTTTATACACACTAAGCCAAATAATGTAACATGGAAAACCTGTTTAAGGATAGCAGCAGAGACAGCAGGAGCTCTATCATATCTGCATTCAGGTGCCTCAATACCCATTATCCACAGAGATGTGAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTCGGAGCTTCAAGATTGGTTCCACTTGATGAAACAGATATTGCCACAATGGTGCAGGGAACAATTGGCTACTTAGACCCAGAGTATATGCAAACACACCAATTGACTGAGAAAAGTGATGTTTATAGCTTTGGTGTAATGCTTGCAGAGCTGCTAACAGGGGAGAAACCTGTTTCTTTTGACAGACCAGAAGAGAAACGAAGCCTTGCAATGCATTTTCTATCTTGCTTGGAAGAGGATCGTATGTTTGAAGTTCTGCAAGTGGGTATTGTGAATGAAGAAAATAAGCAGGAGATTAAGGAAGTTGCTATTCTTGCAGCAAGATGCTTAAGACTTCAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATAAGGCTAATGGAAAAGCACCCTTGGGTCAATACAAACCCAAATGTAGAGGAGACTCGGTACCTACTTCATGAGGCATCGTCTAGCATTTATGAACATGGTGATAGCAGCAACCATGGATGTACGGGGTACGACAGCTTGAGAGATCATGTACTAAATGCCTTTGATGACGGAAGATGA 2250 0.4084 MEKAKNTQLCRVLLVALALQVVAVAAAAPKQTLPGCNYTCGDVKIPYPFGTGKSSTPEQRPSSFEPKFNLTCVNNSQLLLGNVQVLHIDVIQGQMDVLFNISWHCYLRNGSGYHSYPWLQTGAFSISSKENKFLTVGCDSFGYLNSAFDGELYSTGCLTRCYGNRMIVNGTCSGIGCCQVDIPLRMRNISVQASGFNLTESLGTCSYSFVVKEGNYTFNSSDLQDFPYTEFPLVLDWSVGDKKCSASKGEVDYACRNNSHCVDKDTDIGYRCLCNPGYDGNPYHPDGCLDVNECTTSNHTCLDGNHCLNTDGSYRCFCPKGQSGDGTKAGGCHRREPTKIIIGTQLSTSNFISFKFKFFNFFFLAYVYVRTIYMYANMLLFSSLKNSRIGQLEQLRTREDSSQITQIFTQDELKKATNNYDENLIIGRGGYGTVFKGILSHKRIVAVKKSKIVDKSQIEQFINEVVVVSQINHRNVVKLIGCCLETEIPLLVYEFVSNGTLYNFIHTKPNNVTWKTCLRIAAETAGALSYLHSGASIPIIHRDVKSANILLDDTYTAKVSDFGASRLVPLDETDIATMVQGTIGYLDPEYMQTHQLTEKSDVYSFGVMLAELLTGEKPVSFDRPEEKRSLAMHFLSCLEEDRMFEVLQVGIVNEENKQEIKEVAILAARCLRLQGEERPSMKEVAMELEGIRLMEKHPWVNTNPNVEETRYLLHEASSSIYEHGDSSNHGCTGYDSLRDHVLNAFDDGR. 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02433 749 CDD STKc_IRAK 426 691 - -
Seca7g02433 749 Pfam Wall-associated receptor kinase galacturonan-binding 36 94 IPR025287 GO:0030247
Seca7g02433 749 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Seca7g02433 749 SMART egf_5 293 333 IPR000742 -
Seca7g02433 749 SMART egf_5 243 289 IPR000742 -
Seca7g02433 749 FunFam Wall-associated receptor kinase 2 391 495 - -
Seca7g02433 749 ProSiteProfiles Protein kinase domain profile. 420 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02433 749 FunFam Fibrillin 2 285 330 - -
Seca7g02433 749 FunFam Wall-associated receptor kinase 2 496 711 - -
Seca7g02433 749 Pfam Wall-associated kinase 170 275 IPR013695 GO:0004674|GO:0016020
Seca7g02433 749 Gene3D Laminin 242 332 - -
Seca7g02433 749 ProSiteProfiles EGF-like domain profile. 290 328 IPR000742 -
Seca7g02433 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 697 IPR045274 GO:0007166
Seca7g02433 749 ProSiteProfiles EGF-like domain profile. 247 289 IPR000742 -
Seca7g02433 749 ProSitePatterns Protein kinases ATP-binding region signature. 426 449 IPR017441 GO:0005524
Seca7g02433 749 ProSitePatterns Calcium-binding EGF-like domain signature. 290 316 IPR018097 GO:0005509
Seca7g02433 749 CDD EGF_CA 290 325 - -
Seca7g02433 749 CDD EGF_CA 255 280 - -
Seca7g02433 749 Pfam Calcium-binding EGF domain 290 323 IPR001881 GO:0005509
Seca7g02433 749 SUPERFAMILY Protein kinase-like (PK-like) 401 689 IPR011009 -
Seca7g02433 749 Gene3D Phosphorylase Kinase; domain 1 394 495 - -
Seca7g02433 749 Gene3D Transferase(Phosphotransferase) domain 1 496 710 - -
Seca7g02433 749 SUPERFAMILY EGF/Laminin 290 327 - -
Seca7g02433 749 SMART egfca_6 290 333 IPR001881 GO:0005509
Seca7g02433 749 SMART egfca_6 250 289 IPR001881 GO:0005509
Seca7g02433 749 Pfam Protein tyrosine and serine/threonine kinase 425 688 IPR001245 GO:0004672|GO:0006468
Seca7g02433 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Seca7g02433 749 SMART serkin_6 420 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02433 Seca-Chr7 59015721 59021944 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02433 12 749 Receptor kinase-like Gene Family AT1G21230 43.254 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02433 PK_Tyr_Ser-Thr 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02433 - - gsj:114381577 941.414