Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02419 | ATGGGACTCATCAAGAGCACGCACAAGCAACTGGCCTTGGCACTGGTGATGATTGCATTAGCAAGCGTAGGAGCAGCTACTACCACTGCTGATCAAGCCCTGCCCGGCTGCGAAAGCAAATGTGGAAATGTTTCAATTCCATATCCATTTGGCATAGGCGTATCAATTGTCACCGGTCAAAACTGTTTCCTGCAGAAAAAAATGCAACTCAGATGCGATAAATCCATTTTGTATCGCGGAAATGGCAACGTCCAAATTTTGAACATAACCCTCGCAGGTAAAATGGAGATGCTTGCTAGCATCTCCAAGGTTTGCATAAACGGCTCGGATATAACAGAAAATCCATTCAACCTGAGAACTCCGGCTTTCGCGATTTCTAGGGAAGATAACAAATTCGTGAGTGTAGGCTGTGACACTTACGGCTATCTCAGTAATTTTCGCGACGATAAGACGTACACAACCGGATGCTTAACAAGATGTGCCAGCTATGATGACATGAAAACTATGCAATTGGCCATGGACGGAAACTGTACGGGGATTGGGTGTTGCCAGGTGGATATTCCTCCCGCAATGAAGAATATTAGCACACGAGCATATACCTTTAACAATTTCACAAACTCTTGGGGTTTCAACAACTGCAGTTATTCCTTTGTTGTCAAAAACGGCGGTTATAATTTTTCTCTGAGTCATCTAGTGGATGGTCTCCCATTCGAGAAGGTTCCCTTTGTTGTTGATTGGAGTATTAGAGGCCTGACTTGTGAAAATTACCCGCAGAGAGGAGACTATGCATGCAAGGCTAATAGCGAATGTCAGAATTGGACCACTGGATCTGGTTATCGATGCAAATGTAAGGAGGGTTTTGAGGGGAACCCATACCATCCGGATGGTTGTCGAGATATTCAAGAATGTAAGAGTGGTGGTCATAATCACGATTGCATAAGTGATAGTCACTGTGAAGAAATCGAAGGGTCTTTCAAATGTTTTTGTCCTGTTGGGCAAATTGGAGATGAAAAAAGGGGAGGTGCAGGAGAAGGATGCCGACGAAAGCCCAAAGAAGATGTAGTTACAAGGGTTACCATTGGTGCAGCTGCAGGACTTGTGGCTTTGTTTGTGGGGATTTCTTGGCTATACTTGATATACCAGAAAAGAAAACTCATCAAATTAAAGGAAAAGTTCTTTCGACAAAATGGTGGTATAATTTTGCAACAACAACTCTCTACAATCGAGGATTCCTCTCAGACTACTAAAATGTTCACAGCAGAGCAACTTAAGAAGGCCACCAACAATTATGATGAAAGCTTAATCATCGGTAAAGGAGGTTTTGGTACAGTTTTCAAAGGCATTCTATCAGATAATAGGATTGTTGCTATCAAGAAATCCAAAGTAGTGGATCAGAGCCAAATTGAGCAATTCATAAATGAGGTGATTGTACTATCCCAAATTAACCATAGGAACGTGGTCAAACTCTTGGGTTGTTGTTTGGAGACAGAAGTACCTTTACTAGTTTATGAATTTGTTAACAAGGGCACCCTTTTTGATTATATACACAATGAAGGCAAGGTGAGTAATGTATCTTGGGAAACACGTTTAAGGATAGCAACAGAGGCAGCAGGAGCTTTATCTTACTTACACTCAGCTGCCTCCATACCCATTATCCACAGAGATGTGAAGAGTACAAACATTCTCTTAGATGACAATCTCATTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACAGAACTAGCGACAATGGTGCAAGGAACCCTTGGTTACCTGGATCCAGAGTACATGCTAACAAGCCAACTCACTGTGAAAAGTGATGTGTATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAAATCTCTTTCTTTTGATAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGCTTGAAAGAGGATCGCATGTTTGATGTTCTTCAAGATGGCATTTTGAATGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTGTTCTTGCAGCAAAGTGCTTGAGACTAAGAGGGGAGGAGAGGCCTAGCATGAAAGAAGTGGCAATGGAGTTGGAGGGAATAAGGTTAATGAAGAAGCACCCATGGATCAATACAGATCAAAATTTGGAGGAGACCCAATACTTGCTTCATGGGGCATCTAGCATTCAAGACCATGGTGATAGTAGTAACTACCAAAGTACTATGTATGATAGCTTGAGAGATCATGCACTAATTGCCTTCGATGATGGAAGATGA | 2283 | 0.4214 | MGLIKSTHKQLALALVMIALASVGAATTTADQALPGCESKCGNVSIPYPFGIGVSIVTGQNCFLQKKMQLRCDKSILYRGNGNVQILNITLAGKMEMLASISKVCINGSDITENPFNLRTPAFAISREDNKFVSVGCDTYGYLSNFRDDKTYTTGCLTRCASYDDMKTMQLAMDGNCTGIGCCQVDIPPAMKNISTRAYTFNNFTNSWGFNNCSYSFVVKNGGYNFSLSHLVDGLPFEKVPFVVDWSIRGLTCENYPQRGDYACKANSECQNWTTGSGYRCKCKEGFEGNPYHPDGCRDIQECKSGGHNHDCISDSHCEEIEGSFKCFCPVGQIGDEKRGGAGEGCRRKPKEDVVTRVTIGAAAGLVALFVGISWLYLIYQKRKLIKLKEKFFRQNGGIILQQQLSTIEDSSQTTKMFTAEQLKKATNNYDESLIIGKGGFGTVFKGILSDNRIVAIKKSKVVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNKGTLFDYIHNEGKVSNVSWETRLRIATEAAGALSYLHSAASIPIIHRDVKSTNILLDDNLIAKVSDFGASRLVPLDQTELATMVQGTLGYLDPEYMLTSQLTVKSDVYSFGVVLVELLTGEKSLSFDRPEEKRSLAMHFLSCLKEDRMFDVLQDGILNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGIRLMKKHPWINTDQNLEETQYLLHGASSIQDHGDSSNYQSTMYDSLRDHALIAFDDGR. | 761 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02419 | 760 | CDD | STKc_IRAK | 436 | 703 | - | - | |
Seca7g02419 | 760 | CDD | EGF_CA | 299 | 336 | - | - | |
Seca7g02419 | 760 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 26 | 713 | IPR045274 | GO:0007166 | |
Seca7g02419 | 760 | SUPERFAMILY | Protein kinase-like (PK-like) | 410 | 701 | IPR011009 | - | |
Seca7g02419 | 760 | SMART | serkin_6 | 430 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02419 | 760 | ProSiteProfiles | Protein kinase domain profile. | 430 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02419 | 760 | Pfam | Wall-associated receptor kinase galacturonan-binding | 37 | 93 | IPR025287 | GO:0030247 | |
Seca7g02419 | 760 | SMART | egf_5 | 302 | 347 | IPR000742 | - | |
Seca7g02419 | 760 | SMART | egf_5 | 252 | 298 | IPR000742 | - | |
Seca7g02419 | 760 | Pfam | Calcium-binding EGF domain | 299 | 332 | IPR001881 | GO:0005509 | |
Seca7g02419 | 760 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 551 | 563 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g02419 | 760 | FunFam | Wall-associated receptor kinase 2 | 400 | 505 | - | - | |
Seca7g02419 | 760 | Gene3D | Laminin | 252 | 340 | - | - | |
Seca7g02419 | 760 | Gene3D | Transferase(Phosphotransferase) domain 1 | 506 | 724 | - | - | |
Seca7g02419 | 760 | Gene3D | Phosphorylase Kinase; domain 1 | 396 | 505 | - | - | |
Seca7g02419 | 760 | Pfam | Protein kinase domain | 432 | 696 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02419 | 760 | FunFam | Wall-associated receptor kinase 2 | 506 | 723 | - | - | |
Seca7g02419 | 760 | ProSitePatterns | Protein kinases ATP-binding region signature. | 436 | 459 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02419 | Seca-Chr7 | 58804715 | 58809428 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02419 | 32 | 760 | Receptor kinase-like Gene Family | AT1G21230 | 46.549 | 0.0 | 621 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Seca7g02419 | Pkinase | 1.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02419 | - | - | gmx:100819535 | 1048.88 |