Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02419 ATGGGACTCATCAAGAGCACGCACAAGCAACTGGCCTTGGCACTGGTGATGATTGCATTAGCAAGCGTAGGAGCAGCTACTACCACTGCTGATCAAGCCCTGCCCGGCTGCGAAAGCAAATGTGGAAATGTTTCAATTCCATATCCATTTGGCATAGGCGTATCAATTGTCACCGGTCAAAACTGTTTCCTGCAGAAAAAAATGCAACTCAGATGCGATAAATCCATTTTGTATCGCGGAAATGGCAACGTCCAAATTTTGAACATAACCCTCGCAGGTAAAATGGAGATGCTTGCTAGCATCTCCAAGGTTTGCATAAACGGCTCGGATATAACAGAAAATCCATTCAACCTGAGAACTCCGGCTTTCGCGATTTCTAGGGAAGATAACAAATTCGTGAGTGTAGGCTGTGACACTTACGGCTATCTCAGTAATTTTCGCGACGATAAGACGTACACAACCGGATGCTTAACAAGATGTGCCAGCTATGATGACATGAAAACTATGCAATTGGCCATGGACGGAAACTGTACGGGGATTGGGTGTTGCCAGGTGGATATTCCTCCCGCAATGAAGAATATTAGCACACGAGCATATACCTTTAACAATTTCACAAACTCTTGGGGTTTCAACAACTGCAGTTATTCCTTTGTTGTCAAAAACGGCGGTTATAATTTTTCTCTGAGTCATCTAGTGGATGGTCTCCCATTCGAGAAGGTTCCCTTTGTTGTTGATTGGAGTATTAGAGGCCTGACTTGTGAAAATTACCCGCAGAGAGGAGACTATGCATGCAAGGCTAATAGCGAATGTCAGAATTGGACCACTGGATCTGGTTATCGATGCAAATGTAAGGAGGGTTTTGAGGGGAACCCATACCATCCGGATGGTTGTCGAGATATTCAAGAATGTAAGAGTGGTGGTCATAATCACGATTGCATAAGTGATAGTCACTGTGAAGAAATCGAAGGGTCTTTCAAATGTTTTTGTCCTGTTGGGCAAATTGGAGATGAAAAAAGGGGAGGTGCAGGAGAAGGATGCCGACGAAAGCCCAAAGAAGATGTAGTTACAAGGGTTACCATTGGTGCAGCTGCAGGACTTGTGGCTTTGTTTGTGGGGATTTCTTGGCTATACTTGATATACCAGAAAAGAAAACTCATCAAATTAAAGGAAAAGTTCTTTCGACAAAATGGTGGTATAATTTTGCAACAACAACTCTCTACAATCGAGGATTCCTCTCAGACTACTAAAATGTTCACAGCAGAGCAACTTAAGAAGGCCACCAACAATTATGATGAAAGCTTAATCATCGGTAAAGGAGGTTTTGGTACAGTTTTCAAAGGCATTCTATCAGATAATAGGATTGTTGCTATCAAGAAATCCAAAGTAGTGGATCAGAGCCAAATTGAGCAATTCATAAATGAGGTGATTGTACTATCCCAAATTAACCATAGGAACGTGGTCAAACTCTTGGGTTGTTGTTTGGAGACAGAAGTACCTTTACTAGTTTATGAATTTGTTAACAAGGGCACCCTTTTTGATTATATACACAATGAAGGCAAGGTGAGTAATGTATCTTGGGAAACACGTTTAAGGATAGCAACAGAGGCAGCAGGAGCTTTATCTTACTTACACTCAGCTGCCTCCATACCCATTATCCACAGAGATGTGAAGAGTACAAACATTCTCTTAGATGACAATCTCATTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACAGAACTAGCGACAATGGTGCAAGGAACCCTTGGTTACCTGGATCCAGAGTACATGCTAACAAGCCAACTCACTGTGAAAAGTGATGTGTATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAAATCTCTTTCTTTTGATAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGCTTGAAAGAGGATCGCATGTTTGATGTTCTTCAAGATGGCATTTTGAATGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTGTTCTTGCAGCAAAGTGCTTGAGACTAAGAGGGGAGGAGAGGCCTAGCATGAAAGAAGTGGCAATGGAGTTGGAGGGAATAAGGTTAATGAAGAAGCACCCATGGATCAATACAGATCAAAATTTGGAGGAGACCCAATACTTGCTTCATGGGGCATCTAGCATTCAAGACCATGGTGATAGTAGTAACTACCAAAGTACTATGTATGATAGCTTGAGAGATCATGCACTAATTGCCTTCGATGATGGAAGATGA 2283 0.4214 MGLIKSTHKQLALALVMIALASVGAATTTADQALPGCESKCGNVSIPYPFGIGVSIVTGQNCFLQKKMQLRCDKSILYRGNGNVQILNITLAGKMEMLASISKVCINGSDITENPFNLRTPAFAISREDNKFVSVGCDTYGYLSNFRDDKTYTTGCLTRCASYDDMKTMQLAMDGNCTGIGCCQVDIPPAMKNISTRAYTFNNFTNSWGFNNCSYSFVVKNGGYNFSLSHLVDGLPFEKVPFVVDWSIRGLTCENYPQRGDYACKANSECQNWTTGSGYRCKCKEGFEGNPYHPDGCRDIQECKSGGHNHDCISDSHCEEIEGSFKCFCPVGQIGDEKRGGAGEGCRRKPKEDVVTRVTIGAAAGLVALFVGISWLYLIYQKRKLIKLKEKFFRQNGGIILQQQLSTIEDSSQTTKMFTAEQLKKATNNYDESLIIGKGGFGTVFKGILSDNRIVAIKKSKVVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNKGTLFDYIHNEGKVSNVSWETRLRIATEAAGALSYLHSAASIPIIHRDVKSTNILLDDNLIAKVSDFGASRLVPLDQTELATMVQGTLGYLDPEYMLTSQLTVKSDVYSFGVVLVELLTGEKSLSFDRPEEKRSLAMHFLSCLKEDRMFDVLQDGILNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGIRLMKKHPWINTDQNLEETQYLLHGASSIQDHGDSSNYQSTMYDSLRDHALIAFDDGR. 761
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02419 760 CDD STKc_IRAK 436 703 - -
Seca7g02419 760 CDD EGF_CA 299 336 - -
Seca7g02419 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 713 IPR045274 GO:0007166
Seca7g02419 760 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Seca7g02419 760 SMART serkin_6 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02419 760 ProSiteProfiles Protein kinase domain profile. 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02419 760 Pfam Wall-associated receptor kinase galacturonan-binding 37 93 IPR025287 GO:0030247
Seca7g02419 760 SMART egf_5 302 347 IPR000742 -
Seca7g02419 760 SMART egf_5 252 298 IPR000742 -
Seca7g02419 760 Pfam Calcium-binding EGF domain 299 332 IPR001881 GO:0005509
Seca7g02419 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Seca7g02419 760 FunFam Wall-associated receptor kinase 2 400 505 - -
Seca7g02419 760 Gene3D Laminin 252 340 - -
Seca7g02419 760 Gene3D Transferase(Phosphotransferase) domain 1 506 724 - -
Seca7g02419 760 Gene3D Phosphorylase Kinase; domain 1 396 505 - -
Seca7g02419 760 Pfam Protein kinase domain 432 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02419 760 FunFam Wall-associated receptor kinase 2 506 723 - -
Seca7g02419 760 ProSitePatterns Protein kinases ATP-binding region signature. 436 459 IPR017441 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g02419 Seca-Chr7 58804715 58809428 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02419 32 760 Receptor kinase-like Gene Family AT1G21230 46.549 0.0 621
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02419 Pkinase 1.4e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02419 - - gmx:100819535 1048.88