Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02415 ATGGGACTCATCAAGATCAGCAACCGCATGCAACTGGCCCTGGCACTGGTGGTGATGATTGCATTAGCAAGCGTAGGAGCAGCTACTACTACTGTAGCTAACCAAGCCCTTCCCGGATGCGAAAGCAAATGTGGAAATGTTTCAATTCCATATCCATTTGGCATAGGCGTATCAACTGTCAACCGTCGTCAAAACTGTTTCCTGCAGGAAGAAATGCAACTCAGTTGCAATAAATTCATTTTATATCGCGGAAAAGGTAAGATCCAAATTTTGAACATAACCCTCGCAGGTAAAATGGAGATGCTTGGTCCCATCTCCACGGTTTGCATAAACGGCTCGAAGATAACAGGAAATCGTCCCAGTCTGAGAACTCCGGCTTTCGCGATTTCTAGAGAGGATAACAAATTCGTGAGTGTAGGCTGTGACACGTACGGTTATCTCATTAGTTTTCGCGACAATAAGACGTACACAACCGGATGCTTAACAAGATGTGCCAGCTATGATGACATGAAAACTATGCAATTGGACGGAAACTGTACGGGGATTGGGTGTTGCCATGTGGATATTCCTCCTGCAATGAAGAATATTAGTACACGAGCATTTAGCTTTAACAATTTCACAAACTCTTCGGGTTTCAACAACTGCAGTTATTCCTTTGTTGTAAAAAACGACGGTTATAATTTTTCTCTGAGTCATTTGAAGTATGGTCTCCCATTCAACATGACTCCATTTGTTGTTGATTGGAGTGTTAGAAACGTGACTTGTGAAATTTCTAAGCAGAGAGGAGACTATGCATGCAAGGCTAATAGCGAATGTCAGAATTGGACCACTGGATCTGGTTATCGATGCATATGTAAAGAGGGTTATGAGGGGAACCCATATCATCCTAATGGTTGTCGAGATATTCAAGAATGTAAGAGTGATAAACACGATTGCATAAGTGAAAGTCACTGTGAAGAAACTGAAGGGTCGTTCAAATGCTTTTGTCCTGATGGGCAAATTGGAGATGGAAAAAGAGAAGGTGAAGGAGAAGGATGCCGGCATAAGCACAAAGAAGATGTAGTTACAAGGGTTACCATTGGTGCATCTGCCGGGCTCGTGGCTTTGTTTGTGGTGATTTCTTGGCTATATTTGATATACCAGAAAAGAAAACTCATCAAATTAAAGGAAAAGTTTTTTCGACAAAATGGTGGCATCATTTTGCAACAACAACTCTCTACAATAGAAGACTCCTCCCAGTCTACTAAAATGTTCACAGCAGAGCAACTTAAGAAGGCCACCAACAATTATGATGAAAGCTTAATCATCGGTAAAGGAGGTTTTGGTACAGTTTTCAAAGGCATTCTATCAGATAATAAGATTGTTGCAATCAAGAAATCCAAAGTAGTGGATCAGAGCCAAATTGAGCAATTCATTAATGAGGTGATTGTACTATCCCAAATTAACCATAGGAATGTGGTCAAACTCTTGGGTTGTTGTTTAGAGACCGAAGTTCCTTTACTAGTTTATGAATTTGTTAATAAGGGTACCCTTTTTGATTATATACACAATGAAAGCAAGGTGAGTAATGTATCTTGGGAAACACGTCTAAGGATTGCAACAGAGGCAGCAGGAGCTTTATCTTACTTGCACTCAGCTGCCTCAATACCCATTATCCACAGAGATGTAAAGAGTACAAACATTCTCTTAGATGACACTTACACTGCTAAAGTGTCTGATTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACAGAACTAGCGACAATGGTGCAAGGAACCCTTGGTTACCTGGATCCAGAGTACATGCTAACAAGCCAACTCACTGTGAAAAGTGATGTGTATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAAATCTCTTTCTTTTGATAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGCTTGAAAGAGGATCACATGTTTGATGTTCTTCAACTTGGCATTTTGAATGAAGAAAATAAACAGGAGATCAAGGAGGTCGCTATTCTTGCAGCAAAGTGTTTAAGACTAAGAGGGGAGGAGAGGCCTAGCATGAAAGAAGTGGCAATGGAGTTGGAGGGAATAAGGCTAATGGAGAAGCACCCATGGATCAATACAGATCAAAATTTGGAGGAGACTCAATACTTGCTTCATGGGGCATCTAGCATTCCTGACCATGGTGAAAGTAGTAACTACCAAAGTACTATGTATGATAGCTTGAGAGATCATGCACTAACTGCCTTCGATGATGGAAGATGA 2283 0.4109 MGLIKISNRMQLALALVVMIALASVGAATTTVANQALPGCESKCGNVSIPYPFGIGVSTVNRRQNCFLQEEMQLSCNKFILYRGKGKIQILNITLAGKMEMLGPISTVCINGSKITGNRPSLRTPAFAISREDNKFVSVGCDTYGYLISFRDNKTYTTGCLTRCASYDDMKTMQLDGNCTGIGCCHVDIPPAMKNISTRAFSFNNFTNSSGFNNCSYSFVVKNDGYNFSLSHLKYGLPFNMTPFVVDWSVRNVTCEISKQRGDYACKANSECQNWTTGSGYRCICKEGYEGNPYHPNGCRDIQECKSDKHDCISESHCEETEGSFKCFCPDGQIGDGKREGEGEGCRHKHKEDVVTRVTIGASAGLVALFVVISWLYLIYQKRKLIKLKEKFFRQNGGIILQQQLSTIEDSSQSTKMFTAEQLKKATNNYDESLIIGKGGFGTVFKGILSDNKIVAIKKSKVVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNKGTLFDYIHNESKVSNVSWETRLRIATEAAGALSYLHSAASIPIIHRDVKSTNILLDDTYTAKVSDFGASRLVPLDQTELATMVQGTLGYLDPEYMLTSQLTVKSDVYSFGVVLVELLTGEKSLSFDRPEEKRSLAMHFLSCLKEDHMFDVLQLGILNEENKQEIKEVAILAAKCLRLRGEERPSMKEVAMELEGIRLMEKHPWINTDQNLEETQYLLHGASSIPDHGESSNYQSTMYDSLRDHALTAFDDGR. 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02415 760 CDD STKc_IRAK 436 703 - -
Seca7g02415 760 FunFam Wall-associated receptor kinase 2 400 505 - -
Seca7g02415 760 Gene3D Transferase(Phosphotransferase) domain 1 506 724 - -
Seca7g02415 760 FunFam Wall-associated receptor kinase 2 506 723 - -
Seca7g02415 760 FunFam Fibrillin 2 296 340 - -
Seca7g02415 760 Gene3D Laminin 295 339 - -
Seca7g02415 760 SUPERFAMILY EGF/Laminin 301 336 - -
Seca7g02415 760 Pfam Calcium-binding EGF domain 301 332 IPR001881 GO:0005509
Seca7g02415 760 Gene3D Phosphorylase Kinase; domain 1 396 505 - -
Seca7g02415 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 713 IPR045274 GO:0007166
Seca7g02415 760 ProSiteProfiles EGF-like domain profile. 301 336 IPR000742 -
Seca7g02415 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Seca7g02415 760 ProSiteProfiles Protein kinase domain profile. 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02415 760 SMART serkin_6 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02415 760 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Seca7g02415 760 Pfam Protein kinase domain 432 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02415 760 SMART egf_5 254 300 IPR000742 -
Seca7g02415 760 SMART egf_5 304 347 IPR000742 -
Seca7g02415 760 CDD EGF_CA 301 336 - -
Seca7g02415 760 ProSitePatterns Protein kinases ATP-binding region signature. 436 459 IPR017441 GO:0005524
Seca7g02415 760 Pfam Wall-associated receptor kinase galacturonan-binding 40 97 IPR025287 GO:0030247
Seca7g02415 760 Gene3D Laminin 264 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02415 Seca-Chr7 58627081 58630832 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02415 17 760 Receptor kinase-like Gene Family AT1G21230 45.153 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02415 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02415 - - gmx:100819535 1048.88