Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02411 ATGGTACAGTTTACAAAGGATTTCAAGGATTGTTGCTTGTCAAAATTAGTGGATCAAAGACAAATTGAGCAATTCATTAATAAGGTGGTTGTGCTATCACAAATTAATCATAGGAATGTGGTTAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTCCCTTTACTAGTTTATGAATTTGTCAATAATGGTACTCTTTATGATTATTTACACAGTGAAGGAGAGGCAAATTATGTCTCTTGGAAAACTCGTCTAAGGATAGCAGCAGAGGCAACTGGGGCTCTATCTTACCTTCACTTAGCTGCCTCTATACCCATTATCCATAGAGATGTGAAGACTTCAAGATTGGTTCCACTTGATCAAACAGAACTAGCGACAATGGTGCAAGGAACCCTTGGTTACCTGGATCCAGAGTACATGCTAACAAGCCAACTCACTGTAAAAAGTGATGTGTATATCTTTGGAGTAGTGCTTGTAAAGCTGCTAACAGGAGAGAAGCCTCTTTGTTTTGAAAGGCCAGAAGAAAAAAGAAGTCTTGCTATGCACTTTCTATCTTGCTTGAAAGAGGATCGCTTGTTTGAAGTTATTCAAGATGGCATTTTGAATGTAGAAAATATGCAGGAGATCAAGGAGGTTGCTTTTCTAGCAACAAAGTGTTTAAGACTAAGAGGGGAGGAAAGGCCAAGCATGAAAGAAGTGGCAATGGAGTTGAAGGAATAA 717 0.3863 MVQFTKDFKDCCLSKLVDQRQIEQFINKVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLYDYLHSEGEANYVSWKTRLRIAAEATGALSYLHLAASIPIIHRDVKTSRLVPLDQTELATMVQGTLGYLDPEYMLTSQLTVKSDVYIFGVVLVKLLTGEKPLCFERPEEKRSLAMHFLSCLKEDRLFEVIQDGILNVENMQEIKEVAFLATKCLRLRGEERPSMKEVAMELKE. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02411 238 Pfam Protein tyrosine and serine/threonine kinase 16 112 IPR001245 GO:0004672|GO:0006468
Seca7g02411 238 SUPERFAMILY Protein kinase-like (PK-like) 15 234 IPR011009 -
Seca7g02411 238 Pfam Protein kinase domain 121 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02411 238 FunFam Protein kinase superfamily protein 17 63 - -
Seca7g02411 238 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 237 IPR045274 GO:0007166
Seca7g02411 238 Gene3D Transferase(Phosphotransferase) domain 1 6 114 - -
Seca7g02411 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02411 238 Gene3D Transferase(Phosphotransferase) domain 1 115 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02411 Seca-Chr7 58467893 58468662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02411 14 237 Receptor kinase-like Gene Family AT1G21240 57.025 1.25e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g02411 Pkinase 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02411 - - gmx:100819535 351.288