Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02400 ATGTCTAGCACAGCTGGTAAGGTGATCAAGTGCAGAGCTGCGGTGGCATGGGAGCCAGGGAAGGCTCTAGCGATAGAGACAATAGAGGTAGCACCACCACAAAGAGGTGAAGTGCGTTTGAAAATACTCTACACCTCCCTTTGTCGTACTGATGTTTACTGGTGGGATACAAAGGACCAGAATCCACTGTTTCCTCGTATCTTAGGTCATGAAGCTAGTGGGATTGTGGAGAGTGTAGGAGAGGGTGTGACTGAACTCAAACCAGGTGACCATGCCCTGCCAATTTTCACTGGAGAGTGTGGGGATTGTGCACACTGTAAATCAAATGAGAGCAATTTGTGTGAGCTTCTCAGGATCAACACTGATAGAGGAGTTATGCTCAGTGATGGCAAAACAAGATTCTCCAAAAATGGACAACCTATATACCATTTTGTTGGAACCTCTACATTCAGTGAATACACTGTTGTTCATGCTGGATGTGTTGCAAAAATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTGTCAGCTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCGAAGCCTAATTCCTCTGTTGCTGTCTTTGGATTAGGAGCTGTTGGTCTTGCTGCCTGTGAAGGGGCAAGGGTTTCTGGTGCATCTAAAATCATTGGGGTTGATTTAGTTCCCAGCCGATTTGAACCAGCCAAAAAATTTGGGGTCACTGACTTTGTGAACCCAAAAGATCATAAAAAACCTGTACAACAGGTCATTGCTGAAATGACTAATGGAGGAGTGGATCGTGCTGTTGAGTGTACCGGAAACACCCAAGCTTCAATTTCAGCATTTGAATGTGTTCATGATGGTTGGGGTGTGGCTGTACTTGTTGGTGTGCCAAAGAAGGATGCTGAATTCAAGACTCATCCTATGAATTTCTTGGAAGGGAGAACTCTTAAGGGTACCTTCTATGGTGACTACAGACCCCGCTCTGATATTCCTTCTGTTGTGGAGAAGTACCTGAACAAGGAACTGGAGCTGGACAAGTTTATCACTCACTCTGTCCCGTTCACAGAGATTAATAAAGCATTTGAATTGATGCTGAAAGGGGAGGGCATAAGGTGCCTCATCCGTGTGGAAGAGTAA 1143 0.4506 MSSTAGKVIKCRAAVAWEPGKALAIETIEVAPPQRGEVRLKILYTSLCRTDVYWWDTKDQNPLFPRILGHEASGIVESVGEGVTELKPGDHALPIFTGECGDCAHCKSNESNLCELLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCIVSCGFCTGFGATVNVAKPKPNSSVAVFGLGAVGLAACEGARVSGASKIIGVDLVPSRFEPAKKFGVTDFVNPKDHKKPVQQVIAEMTNGGVDRAVECTGNTQASISAFECVHDGWGVAVLVGVPKKDAEFKTHPMNFLEGRTLKGTFYGDYRPRSDIPSVVEKYLNKELELDKFITHSVPFTEINKAFELMLKGEGIRCLIRVEE. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02400 380 CDD alcohol_DH_plants 9 377 - -
Seca7g02400 380 SUPERFAMILY GroES-like 329 376 IPR011032 -
Seca7g02400 380 FunFam Alcohol dehydrogenase 6 14 198 - -
Seca7g02400 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Seca7g02400 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 341 IPR036291 -
Seca7g02400 380 Gene3D - 20 370 - -
Seca7g02400 380 Gene3D - 183 321 - -
Seca7g02400 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Seca7g02400 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Seca7g02400 380 Pfam Zinc-binding dehydrogenase 206 333 IPR013149 -
Seca7g02400 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Seca7g02400 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02400 Seca-Chr7 57612095 57617380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02400 1 370 Monolignol Biosynthesis Gene Families AT1G72680 25.067 3.16e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02400 K18857 - gmx:100775490 684.871