Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02398 ATGTTGAGAGGCCTATTCACGTATAAAAATGTCCAAGTGCAACAGCAGCAGAAGAAGCCACAACCTAAAAAGAAACAACATCAAAGGCAGAACAAGGAGCAGAAAAAACCTCAAAAAGAGAAAAGAGATGCTAAAGAAAACATCAAGAAATGCAAGAAAATGAAATGTTCAGGTTCTCTTTGTAACAACACAAAGGTCATGGCAAGGCCTAAAATAAGAATCCCTGATGTGCACAAGAAAAGGGTCTCACTCTTACATAGTGGTGCATCTAACTACAACAATGGTGCTTCCACCAGATCCATGCAACCTCCTCAACAAGAAATCAATGGACTTGTCTTTGCCTCTTCCTCTTCTTCTTCATTATTAGCATATTCTAATTCCTCTCTCAGTGACCTTTCTCTTAGGGGTACCATTTGTTCTTGCCTTCAATGTGGTGAAATCTTCATGAAAGCTGAAAACTTGGAAAACCATCAAGCTATTAAGCATGCAGGACTTGGTGGCTCCTCCAACCTCTACAACTCAACACCACAATGCAATGTCAAAGACATAATCAAGAACGGTTTCAAAGCCACAAGGGAATCTAATGGTGGAAAAGGGATATTGACAACGACAACAAACGGTGGTGGTGGTGGCGGCATCGTAGAGGAGTATGATTCGGTTGCTGGTGATGTTGTTGGGCTTTATTCAAATTTGGGTGAGTTGTATGTTTTCAACCATAGAGCTATTTTGCCTTGCTTTGTTCTAATCTATACCCTATAG 759 0.4058 MLRGLFTYKNVQVQQQQKKPQPKKKQHQRQNKEQKKPQKEKRDAKENIKKCKKMKCSGSLCNNTKVMARPKIRIPDVHKKRVSLLHSGASNYNNGASTRSMQPPQQEINGLVFASSSSSSLLAYSNSSLSDLSLRGTICSCLQCGEIFMKAENLENHQAIKHAGLGGSSNLYNSTPQCNVKDIIKNGFKATRESNGGKGILTTTTNGGGGGGIVEEYDSVAGDVVGLYSNLGELYVFNHRAILPCFVLIYTL. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02398 252 MobiDBLite consensus disorder prediction 33 48 - -
Seca7g02398 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 164 IPR013087 -
Seca7g02398 252 ProSitePatterns Zinc finger C2H2 type domain signature. 139 162 IPR013087 -
Seca7g02398 252 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 215 250 - -
Seca7g02398 252 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02398 Seca-Chr7 57516066 57517105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02398 152 249 C2H2 Transcription Factor Family AT5G54630 33.099 2.11e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g02398 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02398 - - tcc:18592281 130.183