Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02396 ATGCAACCTCCTCAACAAGAAATCAATGGACTTGTCTCTGCCTCTTCCTCTTCTTCTTCATTGTTAGCATATTCTAATTCCTCTCTCTGTGGCTCTTTTAGAGGAATTCAATTTAGAAGACTCTCTGGCAGCTATGAATGTCGAATGGCGGTTGACCTTGTTCTTGGTTTCACCAAAGACCCTTCTCTGAGGGGTACAATTTTTTCTTGCCCTCAATGTGGTGAAATCTTCATGAAAGCTGAAAACTTGGAATACCATCAAGCTATTAAGCATGCTGAATATAGAGACTACATCAAAGCCAAAGCCGCAAAGCTCACAAAGAAACACCCTCGTTGCATAGCAGATGGAAATGAGCTACTCAAGTTCCACTACACTACCTTTGTGTGCCCGCTAGGACTTGGTGGATCCTCCAACCTCTGCAACTCAACACCGCAATGCAATTTCAGTGGCATAATGAAGAATGGTTTCAAGGCCACAAGGGAATCCAATGGTGAAAAGGGGATATTGACAACGACAACAAGTGGGAGAGCACATGACAAAGCAGGGGTTGAGAGTAATGACAAGAAATCAATGTTGGTTTGCGGGGTGATGGCAGGGAGGGTGAAGAAGAATAATAATAGTGTAGAAGGTGGTGGTGGTGGCATCGTGGAGGAGTATGATTCGGTTTCTGGTGATGTTGTTGGGTTTATTCAAATTTGGGTGAGTTGTATGTTTTCAACCATAGAGCTATTTTGCCTTGCTTTGTTGTAA 750 0.432 MQPPQQEINGLVSASSSSSSLLAYSNSSLCGSFRGIQFRRLSGSYECRMAVDLVLGFTKDPSLRGTIFSCPQCGEIFMKAENLEYHQAIKHAEYRDYIKAKAAKLTKKHPRCIADGNELLKFHYTTFVCPLGLGGSSNLCNSTPQCNFSGIMKNGFKATRESNGEKGILTTTTSGRAHDKAGVESNDKKSMLVCGVMAGRVKKNNNSVEGGGGGIVEEYDSVSGDVVGFIQIWVSCMFSTIELFCLALL. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02396 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 96 IPR013087 -
Seca7g02396 249 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 93 225 - -
Seca7g02396 249 SUPERFAMILY ADP-ribosylation 99 222 - -
Seca7g02396 249 Gene3D - 75 227 - -
Seca7g02396 249 ProSitePatterns Zinc finger C2H2 type domain signature. 70 91 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02396 Seca-Chr7 57354463 57355632 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02396 33 203 C2H2 Transcription Factor Family AT1G75710 35.714 4.24e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g02396 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02396 - - jre:109005724 268.085