Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02377 ATGGGTCTTACCAATGTTTCTGTCCACCTGGTAAATCTGGAAATGGAACAAAAGAAGGAGGATGCCACCATAGAGATGTACTTACTAAGGTTGTTATTGTTCAGTGAACAATTCAAGAATTGCGTTCGACTTATTTTGAATGCAGGAGTTGGAGCCGGATTTATTGTTCTATTTGTGGCGACTTCTTCATTGTACTTAATATACCAAAAAAGGAAACTAATCAAACAGAAAGAGAAATTCTTTCAAGAGAATGGAGGTTTCATTTTGCTACAGCAACTCCGTACAAGAGATGACTCATCCCAAGCTACTCAAGTTTTCACAGAAAATGAACTAAAGAAGGCTACCAATAACTTCGATGAGAGTTTAATCATTGATAAGAGCCAAATTGAGCAGTTCATTAATGAGGTGGTTCTTCTATCCCAAATAAATCATAGGAATGTGGTCAAACTTTTAGGATGTTGCTTAGAGGCAGAAGTTTCTTTACTAGTAGATGTGAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCTAGATTAGTTCTACTTGATCAAACTGACATAGCCACAATGGTGCAGGGAACAATTGGCTACTTAGACCCAGAGTATATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTGTATAGCTTTGGAGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAACCTCTTTCTTTTGATAGGCCGGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGCTTGAAAGAGGATCGCATGTTTGATGTTCTTAAAGTTGGCTTCTTGTGTGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGATGACAAGCCTAGCATGAAGGAAGTTGCAATGGAGTTGGAGGGAATAAGGCTAATGGAGAAGCATGCTTGGATCAATACAGATGTAAATCTGCAGGAGACTCAGTATTTGCTTCATGAGCAAAAATCTAGCAATTATGAACATGGTGATAGTAGCAGCTATCAAAATACTGGGTATGACAGCATCAAGGATCATTCACTAATTGCCTTTGATGATGGAAGATGA 1113 0.3926 MGLTNVSVHLVNLEMEQKKEDATIEMYLLRLLLFSEQFKNCVRLILNAGVGAGFIVLFVATSSLYLIYQKRKLIKQKEKFFQENGGFILLQQLRTRDDSSQATQVFTENELKKATNNFDESLIIDKSQIEQFINEVVLLSQINHRNVVKLLGCCLEAEVSLLVDVKSANILLDDTYTAKVSDFGASRLVLLDQTDIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPLSFDRPEEKRSLAMHFLSCLKEDRMFDVLKVGFLCEENKQEIKEVAILAAKCLRLKGDDKPSMKEVAMELEGIRLMEKHAWINTDVNLQETQYLLHEQKSSNYEHGDSSSYQNTGYDSIKDHSLIAFDDGR. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02377 370 ProSiteProfiles Protein kinase domain profile. 1 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02377 370 Gene3D Transferase(Phosphotransferase) domain 1 164 348 - -
Seca7g02377 370 SMART serkin_6 54 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02377 370 FunFam Wall-associated receptor kinase 2 155 332 - -
Seca7g02377 370 Pfam Protein kinase domain 163 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02377 370 SUPERFAMILY Protein kinase-like (PK-like) 124 318 IPR011009 -
Seca7g02377 370 Gene3D Phosphorylase Kinase; domain 1 95 163 - -
Seca7g02377 370 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 164 326 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02377 Seca-Chr7 56754975 56757370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02377 49 370 Receptor kinase-like Gene Family AT1G21230 40.547 3.11e-88 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02377 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02377 - - gsj:114381577 473.011