Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02373 ATGGAACTGAAGGTGATGAAGCACATGAAACTAGTCTGGTTACTGTTAATGGTTGCATTAGCAGTTGCAGCTGATCAAGCCCTGTCCCCAGAAACAGCCACACCAAAACAAACGTTGCCTGCTGGCTGCAATTACACCTGTGGAGATGTCGAAATTCCATATCCATTCGGCATAGGCAATTCATCTACAGAAGATCAACGACCCTGTTACTTGGAGCCCAAATTTAATCTCACTTGTAACGACTCCCAATTATTATTGGGTAACGTACAAGTTTTACACATAGACAACCTGAAAGGTCAAGTAGACGTGTTGTTTTATGTCTCAATAACGGATTGCTATATGCAAAATGGAACCGAATATGCCTCCAACATTCCTCAGCTTGGTACTGCTGATTACAGCATTTCAAGCAAGGAAAACAAGTTCATAACTGTTGGTTGCGACAGTTTTGGCTATCTCAACAGCTTTTTCTTGGGGCATATGCATTCAACGGGATGCTTAACTAGATGTTATAACGATACAGAGGGGATTGAAGAGGGAACGTGTTCGGGTATAGGGTGTTGCCAGGTCGATATTCCTCCTATAATGAGGAATATTAGTGTACAAGCATTTGGCTTCAATTCAACGGAATATCAGGGAACCTGCAGCTATTCCTTTGTTGTCAAAGAAGGAAACTATACTTTCTCTACCAGTCATTTGCAAAATTTTCCTTACTCGGAATTCCCTTTGGTTCTTGATTGGAGCGTAGGAGACCAAAAATGCAATGCTTCAAAAGGTGGAGTTGACTATGCCTGCAGGAACAATAGCCACTGCGTTGACAAGGACACTGATATTGGTTACCGATGCTTATGCAATCCAGGTTATGATGGGAACCCCTACCATCCGGATGGCTGCATAGACGTCGACGAATGTAAGACATCGAATCATACATGCTTAGATATATATCATTGTCTCAACACGGATGGGTCTTACTTATGTTTCTGTCCACCTGGTCAATCCGGAAATGGAACAAAAGAAGGAGGGTGCTACCGGAGAGATGTACTTACTAAGGTTGTCATTGGAGTTGGAGCCGGATTTATTGTTCTATTTGTGGCGACTTCTTCATTGTACTTAATATACCAAAAAAGGAAACTAATCAAACAGAAAGAGAAATTCTTTCAAGAGAATGGAGGTTTCATTTTGCTACAGCAACTCCGTACAAGAGAAGACTCATCCCAAGCAACTCAAGTTTTCACAGAAAATGAACTAAAGAAGGCCACCGACAACTTTGATGAGAGTTTAATCATTGGTAAAGGAGGTTATGGAACTGTTTACAAAGGAATTCTACCTGATAAACGAATTGTTGCTGTCAAGAAGTCCAAAATTGTAGATAAGAGCCAAATTAAGCAATTCATTAATGAGGTAGTTCTTCTATCCCAAATCAATCATAGGAATGTGGTCAAGCTCTTAGGATGTTGCTTAGAGGCAGAAGTTCCTTTACTAGTATATGAATTTGTCAGCAATGGTACCCTTTTTGATTTTATACACACTAAAAGAAAGCCCAACGATAATGTAACATGGAAAACTCGTCTAAGGATAGCAGCGGAGACAGCGGGAGCTTTATCATATCTACATTCAGCTGCCTCAGTACCCATTATCCATAGAGATGTGAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCTAGATTAGTTCCACTTGATCAAACTGACATAGCCACAATGGTGCAGGGAACAATTGGCTACTTAGACCCAGAGTATATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTGTATAGCTTTGGAGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAACCTCTTTCTTTTAATAGGCCGGAAGAGAAAAGAAGCCTTGCAATGCACTTTCTATCTTGCTTGAAAGAGGATCGCATGTTTGATGTTCTTCAAGTTGGCATCTTGTGTGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGATGACAGGCCTAGCATGAAGGAAGTCGTTATGGAGTTGGAGGGAATAAGGCTAATGGAGAAGCATGCTTGGATCAATACAGATGTAAATCTGCAGGAGACTCAGTATTTGCTTCATGAGCAAAAATCTAGCAATTATGAACATGGTGATAGTAGCAGCTATCAAAATACTGGGTATGACAGCATCAGGGATCATTCACTAATTGCCTTTGATGATGGAAGATGA 2265 0.4102 MELKVMKHMKLVWLLLMVALAVAADQALSPETATPKQTLPAGCNYTCGDVEIPYPFGIGNSSTEDQRPCYLEPKFNLTCNDSQLLLGNVQVLHIDNLKGQVDVLFYVSITDCYMQNGTEYASNIPQLGTADYSISSKENKFITVGCDSFGYLNSFFLGHMHSTGCLTRCYNDTEGIEEGTCSGIGCCQVDIPPIMRNISVQAFGFNSTEYQGTCSYSFVVKEGNYTFSTSHLQNFPYSEFPLVLDWSVGDQKCNASKGGVDYACRNNSHCVDKDTDIGYRCLCNPGYDGNPYHPDGCIDVDECKTSNHTCLDIYHCLNTDGSYLCFCPPGQSGNGTKEGGCYRRDVLTKVVIGVGAGFIVLFVATSSLYLIYQKRKLIKQKEKFFQENGGFILLQQLRTREDSSQATQVFTENELKKATDNFDESLIIGKGGYGTVYKGILPDKRIVAVKKSKIVDKSQIKQFINEVVLLSQINHRNVVKLLGCCLEAEVPLLVYEFVSNGTLFDFIHTKRKPNDNVTWKTRLRIAAETAGALSYLHSAASVPIIHRDVKSANILLDDTYTAKVSDFGASRLVPLDQTDIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPLSFNRPEEKRSLAMHFLSCLKEDRMFDVLQVGILCEENKQEIKEVAILAAKCLRLKGDDRPSMKEVVMELEGIRLMEKHAWINTDVNLQETQYLLHEQKSSNYEHGDSSSYQNTGYDSIRDHSLIAFDDGR. 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02373 754 ProSiteProfiles EGF-like domain profile. 299 337 IPR000742 -
Seca7g02373 754 SUPERFAMILY Protein kinase-like (PK-like) 404 694 IPR011009 -
Seca7g02373 754 CDD STKc_IRAK 428 696 - -
Seca7g02373 754 Pfam Wall-associated receptor kinase galacturonan-binding 43 100 IPR025287 GO:0030247
Seca7g02373 754 Gene3D Phosphorylase Kinase; domain 1 392 497 - -
Seca7g02373 754 ProSitePatterns Calcium-binding EGF-like domain signature. 299 325 IPR018097 GO:0005509
Seca7g02373 754 Gene3D Laminin 302 341 - -
Seca7g02373 754 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Seca7g02373 754 Pfam Protein kinase domain 426 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02373 754 CDD EGF_CA 264 289 - -
Seca7g02373 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Seca7g02373 754 Gene3D Laminin 250 301 - -
Seca7g02373 754 SUPERFAMILY EGF/Laminin 297 334 - -
Seca7g02373 754 FunFam Wall-associated receptor kinase 2 498 716 - -
Seca7g02373 754 SMART egfca_6 253 298 IPR001881 GO:0005509
Seca7g02373 754 SMART egfca_6 299 342 IPR001881 GO:0005509
Seca7g02373 754 FunFam Fibrillin 2 294 338 - -
Seca7g02373 754 SMART serkin_6 422 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02373 754 Pfam Calcium-binding EGF domain 299 341 IPR001881 GO:0005509
Seca7g02373 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 708 IPR045274 GO:0007166
Seca7g02373 754 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Seca7g02373 754 Gene3D Transferase(Phosphotransferase) domain 1 498 718 - -
Seca7g02373 754 ProSiteProfiles Protein kinase domain profile. 422 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02373 754 CDD EGF_CA 299 333 - -
Seca7g02373 754 SMART egf_5 302 342 IPR000742 -
Seca7g02373 754 SMART egf_5 252 298 IPR000742 -
Seca7g02373 754 FunFam Wall-associated receptor kinase 2 392 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02373 Seca-Chr7 56526747 56531912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02373 9 754 Receptor kinase-like Gene Family AT1G21230 45.052 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g02373 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02373 - - gsj:114381577 1031.55