Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02369 ATGGATAGCCACCACCCCCACTTCATCAACCACCACCACCACCACCATCACCAACATCAACCCCAACAGCACCGCACAAGATATGCTCCTTTGACTCCTCAATCTCATCATCACCACAACCCTCACCATCTCCCTCCTCCGCCTCCTCCGCCGTCCGCTCTGCCGCCACCGCCTCCTCCTCCTCTCTCCTACCGCACCATCCACACCCCTCCTCCTCCCCCAACCTACCACAACCCTCCTCCATCTCACCAATCCCAACAATTCCCTCTTTACACCCACCGCCCCATCGAAGAAGAACGCCCTCTCCCAACCACCAACCACCACCTCCACCACACCTTCTCCTCCAACCGAAGCCTCCCTGATGACGTCCTCCCTCGCCGTGCCCTCCCTGATTTTGACCACCGCCGCAATCCCAAACCCCACTGGAACCCTAGCCCTGACAATCACCCTCAACGAAATTACCCTCCCCTCGATTACGATCGAGAATTGAACCACCATTATCATCACCGTCCCCCGCCACCGCCACCACCACTGTCTTATCCACCGATTGAAAAGCTTCGGTATGACCCCGAGGTTGGATGCTCCAGATTGAAGACGGAATGCCTCGATGAAAACCCAAGAGAAGGGTTCATCTGGGGAAGCAAAGGTACCAGCGACGGCAGTTACCGCAGCATTCTCGAGGAACCCACTCGTCTGGCGGTGCCGATTGTCGACGCCGACTCAAAATCCGGCGGTTACGTTCGCGCCTATGGTGTGGAATCCGATGCTGACGTGTCTACCAGGGTTGGCAGGGTCCTTAGCAGAAGGTTGGTGATTGATAGAAAGGGATCAAGAGAGTTGCACGATTCTCCTTCTTATGAATTGGTGAACGATGAAATAGGTTCTCCCATGAAACGAGAGTACTATGGTTCTGAAATGGTTAGGTATAATAGTAACAACTGCAGAGGGAACAGCAGGGAGTGTGGTCATGAATTCACTCGCACTCCTCCGAAGAAACAGATCCAGAAGAAGAGTGCACTTCTCAGAATCCAGACGGTAAAACCCAATCACAGGAATCGCGATGTTGAACAGTTACGTTATGCTGGCTATGCTCCTGACTCTAACTCTAATTTCTTTAGGGGTAAGGAGCAACATGGGTATATAGGTCATGGGTTGAAGGCTGAAGAGAGAGAAAGAGAAGGAAGCCCCATGGAGCTTGATATTTCTTTCGAATCAAACTCTCTGGTGGCCAAGGCTATTATTGCACCTTCAAGTTCGGGTGCTCCAATTTCTGATTCCAATTTGGCTCCAGTTTCTGACTCGCCGTGCAAAACAACTGATACCTCTAGTTCGGGCAAGGAATTGAGCTTGCAGAAGAATGTAGTTGATGCTTCTTCTCAGCCTTGTGCTGGTGTGTCAGGTAATCCTCAAGGGAAAAATGAGGTGGCAGTTTCAGTTGAAGTTGCCGATATTGGTTCTGGTAAATCGACCCCTAGGACTATCAAGAAGAAAAAAATTGTTAAAAGAGTGGTGAAGAAAACTGTCACGAACCCTAACTCAACTGTGTCAAGTTCACTATCTGAGAATTTGCAGCATGGAACTGTGCAAGCAGATATTGTCGCACTCAGTTCATCAACTACCCCTGGTCCTGACAAAACTGAGACTTGTTTGGAGGAGAAAAGCACCACTGTTGACAAGGTGTTTGTGCCAGAAGGGAATGTATTGACTGAAGATAAAAATGAAGATCTATCCCTGCTGAGTTTGGGGCCAGATTGCAGGTCACAAGAATGTAAGACTGACGAAGATTCTGATATTAGGAAAGTATCCAGGTTTGAAAGAGAGGGAAACATTTCAACTTCTCCATCTTGTGCTTCTAGTAGTGAAGATAAAAAGAGTGGTCCTGATTGTTTAGATGCAAATAATTCTCTCCATGACTTGCTTTGCATGCCAAATATTGAAATGGTTACTAATTCATTGAATGGTAGTACTTCTGAAATCAGTTACATGGATTCTAATAATAAGCAATTATGTCAGAATGAAGCGTCTCTATCACCTGGGAAATATTCAAATATAGGATGCTCAGAGAACAGAAATCTTGTAGATGTAGGGGATGAAATGACTCGCAAATTGTTTAATTCAGCTGATAGTGTCATTTCCACAAATCTTATAGATGCGCATAATTCTACTGATAGCAAGGTTTATGACTTCAATAACAATGGTCTTGCAAGTTTAGAAGAGAATTTCATCGTTACTGGTGATGGGAATAATGACACTATTAGTAAGGCATATTATGAAAATATGGCCCCTACAATAACTCAGAATGCTATTTTGGAAGAAAAATCAGATATAGCCACCCCTCTGCGAAGTGGAATTGTTGCATTTTCAAGTTCAGGAAATACTATGATTCAGGATGGTCTAGGTTGCCTACAGTCGGGTTTTGATAATGGATCATCTAATTCAGAAGATAGTATCATTGTTCACCATTTTGGTATCATGAAAGATGATAATGATGATTCAAATAAGGTTTCACCACTTCCTAAAAGGAAAAAATTCACCACTAGTCACAAAAATTTTACTCAATGTCAATCTGAATTCAGTGATGCAATTGTGGCTACCACATCTAATGCGGAAGTTTCTATCAGTTTTAGTGATAACCAAGCACATAAAAAAGAAGAAATTGCAATGTCAAGCATAGATATTCTGTCTATTGCTAAGTCGAGGCCTTATTCAGAGGACACTGCTAAATTGTCGGACAAAATTCTGGTTGCAGGGTCTTTTGATTCTATGGATGTAAGTAAGGAAGCCATGATTTCTGAGCATTTGGAGTTGCAGCACTCAGATATTGTCTCAAATTCACTGTGTGAGGGCTTGGTCTTTCCAAATGTTCAATTCTCAATGCCGGAACCTGAGCAGATAGAAAATATTACTCCAATTGTGCCAGTAAGTAATACTCAAACTGACATTTTGGTTGTTGGAAACATCAAGGATGAAAAGACCGATTTACAGGTTGAAGAAAATTACCAGTATAAAGATTTTGTGCGAAGGTCCCCAAGGGCTAATATGGAACCTAATGATCTCAACATGAAGGATGATTTACATACAGACCAAAACCTTATATCATGCCCAACTAATGGTGATGAAGTCACTACTGGTAATTCAAATGATGAATTGATTGAGGATTCACTTGATGCTTTATCAGATATATGTTCTCAAGGGTTGACATCTGAAGTACCAGATGAAAGGAATTTAGAACTTACAACAATCCATGATGAAAACATTTGTGGGGATGAAGAACATTCGAATAACATATCTGTGGTTGAAAATGGTTCTGACTTACATACTTCATCAATACAAAATACTAAAATAATTGTGAAGTCAGAACATGCAATTGGACATAGTAACCCAATAATGAGGAATATAAGGCTAGAACAGACCCAAGTTCATTCCAAAGTTACAACTACGGGTATAAATTCATATTGTTCCGAATTAAATGGGAGCAAAATTCAGCCTGGTGGTGTCTTTCATAAAACTTTCCAAGGTCATTCTTTCACCTTTTCAAAGACAAAAACAAAGACATCTGCCTCTTCAACCCATATTTCAAAACCACGAACTTGGCTTCGTACAGGTAATAATCCTCCCACTTTTGTACCTAGAATCAAGCCTTTGACGGGAACAGTTTCTTCAAAAAGGCCTATTCTAGAAAGGAAAGGGAACTTTCAAAATGCCTCTTACATTCGTAAAGGTAACAGTCTAGTAAGGAAACCCACTCCAGTTTCTAGTTTACCTCAACTCTCCTTAGCTAATCAATCACCTTTGGACTTAGATGAAAAACAAAAGTGCACTAGATCTGAAAGCAGGGCTGATGTGATAGATCAACCAATCTACTTGAGAACAAAAGCAAATGCTCCTCAGCAAAGACAGAGAACACCTCCACTACCCATTGACACCAAATCAGAGGAAAATATATCTTCCCCAATGGTAGAACCTCCTTCTAGTGGTTGTGATGAAAATGTATCAGATCATGGGAAATTTAAAGAAATTAATGATGTGCCAAACTCTTCTGAAGATGTGCTGAAGCATTATGAAACTCTTGAAAATCAATCCGGTCCATCTAACAATGGGGAGAGCCAAGTTGAAACAAATGATGGAAATATTTCTTCTCTGATCACTAAGAGAATAGTATATATAAAGCCCAAAACAAATAAGTTGGTTGCAACTTCAAATTCTTGTGATGTTATTGTCTCTACTGATGACAAGGGCCAGACAACCTTCTCCGATGGCTACTACAAGAGGAGCAAAAATCAATTGGTTAGGACTACATTTGAAAGTCATATCAACCAGACAATTACAATGCCCAATAGCACTATAAATTCTGATGGGCATGGGGCTAGGAAGGTTCTCTGCAATAGGAGGTTTACTAAGAGGCGGACCCATAAGGTTGCTGGGAGTTCATGCAAACCTTCAAGAGCCTCGTTAGTGTGGACACTGCGTAGCAAAAATTCATCTGAAAATCACAGGGACTATCAAAAGATTTTACCTCACTTGTTTCCATGGAAAAGAGCAACATATTTAAGAAACTTCATTCATAATTCTGCTTCAAGCTGCAATAGTAGTTCCTTATCTGCTATCAGCAAGAAATTGCTTCTGTTGAGAAAGAGGGACACTGTTTACACTAGGTCGACCCATGGGTTTTCTCTTTGGAAATCCAAGGTTTTAGGTGTTGGTGGGTCTAGTCTAAAATGGTCCAAATCCATTGAGAAGCACTCAAAAAAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCAGTTGAGAGGAAGAAGAGAGAGCAGAAAGATGCGGCTTGCATCGGTTCTCAGACAAAGAGTAGGAAGCATTCTTTCCATGAGTGTTTGTCATATCAAAATGCAGAAGTGTCTCTTTGTTTTTGTGCTATTGGAACTTATTTATTCTCAATGTATTCATTATCTTTGTCTGTTACTCTGACTTTGAAAGTAGTGGTTGATTGTGTAGGAGAACGTATATTTCGTATTGGTTCAGTTCGCTACAGAATGGATCCTTCAAGGCGGACACTTCAGAGGATTTCAGATGATGAATCCCTGTCCTCTGCCTCTCCCGGTTCGAGTTTGGCTTCCAAAAGAACTTACATTCCGAGGAGATTAGTGATTGGAAATGATGAATATGTCCGCATTGGCAATGGTAACCAGCTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAGAAAGTCAGATGGAGCCTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTCACAAGATTTGGGAAATGTAACAAGGATGGAAGGAAGTGTCCTTATATTCATGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCAGACTGTTCTTATTTTTTGCAAGGTTTATGCTCAAACGGAAATTGCCCATATAGACATGTCAATGTGAACCCTAAGGCATCTGTATGTGAAGGATTTCTTAAGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAACCTGTACCCAAGGAACAAAATGCAAGCTTCACCACCCCAAAAAACAAAGCAAGGGAAAGAAAAGAAAGAGATCTGGAGATCAGAACAGTAGAGGGCGTTACTTTGGTTCTATTCCCGCTGATGTTTCTGAACCTGGGATGATGATGGCTCCAAGGCGACGTCAAAAGAAGGACGACCTTGAAAATGAACTTTCCGATTACATCAGTCTTGATGTGAATGAAGAAGTTACAGACACCGTTGATCAAGCATTTGAGCACTCAACATTTTGTGACAATGATTCCTTTGATTTACAGTTGGATACTTCTGATGAACTTATTAAACCAGTTCTTATAATAACAAAATTCACATCATAA 5976 0.4173 MDSHHPHFINHHHHHHHQHQPQQHRTRYAPLTPQSHHHHNPHHLPPPPPPPSALPPPPPPPLSYRTIHTPPPPPTYHNPPPSHQSQQFPLYTHRPIEEERPLPTTNHHLHHTFSSNRSLPDDVLPRRALPDFDHRRNPKPHWNPSPDNHPQRNYPPLDYDRELNHHYHHRPPPPPPPLSYPPIEKLRYDPEVGCSRLKTECLDENPREGFIWGSKGTSDGSYRSILEEPTRLAVPIVDADSKSGGYVRAYGVESDADVSTRVGRVLSRRLVIDRKGSRELHDSPSYELVNDEIGSPMKREYYGSEMVRYNSNNCRGNSRECGHEFTRTPPKKQIQKKSALLRIQTVKPNHRNRDVEQLRYAGYAPDSNSNFFRGKEQHGYIGHGLKAEEREREGSPMELDISFESNSLVAKAIIAPSSSGAPISDSNLAPVSDSPCKTTDTSSSGKELSLQKNVVDASSQPCAGVSGNPQGKNEVAVSVEVADIGSGKSTPRTIKKKKIVKRVVKKTVTNPNSTVSSSLSENLQHGTVQADIVALSSSTTPGPDKTETCLEEKSTTVDKVFVPEGNVLTEDKNEDLSLLSLGPDCRSQECKTDEDSDIRKVSRFEREGNISTSPSCASSSEDKKSGPDCLDANNSLHDLLCMPNIEMVTNSLNGSTSEISYMDSNNKQLCQNEASLSPGKYSNIGCSENRNLVDVGDEMTRKLFNSADSVISTNLIDAHNSTDSKVYDFNNNGLASLEENFIVTGDGNNDTISKAYYENMAPTITQNAILEEKSDIATPLRSGIVAFSSSGNTMIQDGLGCLQSGFDNGSSNSEDSIIVHHFGIMKDDNDDSNKVSPLPKRKKFTTSHKNFTQCQSEFSDAIVATTSNAEVSISFSDNQAHKKEEIAMSSIDILSIAKSRPYSEDTAKLSDKILVAGSFDSMDVSKEAMISEHLELQHSDIVSNSLCEGLVFPNVQFSMPEPEQIENITPIVPVSNTQTDILVVGNIKDEKTDLQVEENYQYKDFVRRSPRANMEPNDLNMKDDLHTDQNLISCPTNGDEVTTGNSNDELIEDSLDALSDICSQGLTSEVPDERNLELTTIHDENICGDEEHSNNISVVENGSDLHTSSIQNTKIIVKSEHAIGHSNPIMRNIRLEQTQVHSKVTTTGINSYCSELNGSKIQPGGVFHKTFQGHSFTFSKTKTKTSASSTHISKPRTWLRTGNNPPTFVPRIKPLTGTVSSKRPILERKGNFQNASYIRKGNSLVRKPTPVSSLPQLSLANQSPLDLDEKQKCTRSESRADVIDQPIYLRTKANAPQQRQRTPPLPIDTKSEENISSPMVEPPSSGCDENVSDHGKFKEINDVPNSSEDVLKHYETLENQSGPSNNGESQVETNDGNISSLITKRIVYIKPKTNKLVATSNSCDVIVSTDDKGQTTFSDGYYKRSKNQLVRTTFESHINQTITMPNSTINSDGHGARKVLCNRRFTKRRTHKVAGSSCKPSRASLVWTLRSKNSSENHRDYQKILPHLFPWKRATYLRNFIHNSASSCNSSSLSAISKKLLLLRKRDTVYTRSTHGFSLWKSKVLGVGGSSLKWSKSIEKHSKKANEEATLAVAAVERKKREQKDAACIGSQTKSRKHSFHECLSYQNAEVSLCFCAIGTYLFSMYSLSLSVTLTLKVVVDCVGERIFRIGSVRYRMDPSRRTLQRISDDESLSSASPGSSLASKRTYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGRKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNGNCPYRHVNVNPKASVCEGFLKGYCADGNECRKKHSYVCPTFEATGTCTQGTKCKLHHPKKQSKGKKRKRSGDQNSRGRYFGSIPADVSEPGMMMAPRRRQKKDDLENELSDYISLDVNEEVTDTVDQAFEHSTFCDNDSFDLQLDTSDELIKPVLIITKFTS. 1992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02369 1991 SMART c3hfinal6 1786 1810 IPR000571 GO:0046872
Seca7g02369 1991 SMART c3hfinal6 1757 1785 IPR000571 GO:0046872
Seca7g02369 1991 SMART c3hfinal6 1866 1888 IPR000571 GO:0046872
Seca7g02369 1991 SMART c3hfinal6 1839 1865 IPR000571 GO:0046872
Seca7g02369 1991 SMART c3hfinal6 1812 1837 IPR000571 GO:0046872
Seca7g02369 1991 MobiDBLite consensus disorder prediction 101 184 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 603 629 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 1879 1934 - -
Seca7g02369 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1757 1786 IPR000571 GO:0046872
Seca7g02369 1991 PANTHER CCCH ZINGC FINGER 322 1987 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 124 142 - -
Seca7g02369 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1812 1838 IPR000571 GO:0046872
Seca7g02369 1991 MobiDBLite consensus disorder prediction 8 23 - -
Seca7g02369 1991 FunFam Zinc finger CCCH domain-containing protein 7 1840 1901 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 419 449 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 154 169 - -
Seca7g02369 1991 Gene3D - 1784 1838 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 1291 1330 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 607 622 - -
Seca7g02369 1991 Coils Coil 1586 1606 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 1 87 - -
Seca7g02369 1991 FunFam zinc finger CCCH domain-containing protein 3 1787 1838 - -
Seca7g02369 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1839 1866 IPR000571 GO:0046872
Seca7g02369 1991 MobiDBLite consensus disorder prediction 1291 1323 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 1882 1901 - -
Seca7g02369 1991 Gene3D - 1839 1902 - -
Seca7g02369 1991 MobiDBLite consensus disorder prediction 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02369 Seca-Chr7 56368005 56378293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02369 1763 1892 C2H2 Transcription Factor Family AT2G32930 33.088 1.09e-06 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Seca7g02369 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02369 - - gmx:100788859 1909.03