Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02363 ATGCAAGAAAAGGGTAGTGGAAAATATTCAGATCACAGCTTAGCTAAGGTTTTCATGGATTCTACAGAAGATATTGGGAAGAAAAGTTGCTTCATTTGTGCTTTCACCCCAGCATTGCCAGATTCATCATGCCACCAATCTGCAGAAAAGTTTTGTGGTAATAGTGAGAACTCTTTGGCTATAGTGCCTGCACAGACCACTGATGCTGGTTCTAGCAGGAAAAATTTGCATGGTAGAGAAGTAACTGAATTGAAACCTGGTTGGCCATTACTGCATAGAACAAAATTATTAGATAGGCAATCTAGTGAAAGATCATCCTTGCGCCAGATCTCTGTGGTCCAGTGGGCAATGAGGCTGCCCTCTAGAAATCTTTCATATGATTCAAATTATAACCATAAAACAAACAATTGTGCACAATATAAAGATCAATTTCTGGATCTAGATAGCAAAAGTGGTGCTCTTGTTCCAGTGGATCCTGAAATAGGGATTGCTGCTTCACCTGAACGTAATTCAAGTAGTAGCATTCCTAAAGAATTGGAGGGCCTTCATGAGAAATACTCATCCACTTGCAGATTGTTTAAGTACCAAGAACTTCTATCAGCAACATCAAATTTCTTGCCTGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGTCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGATGATGTTTTGAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACTTTGCATCATAAAAACATTATTTCTCTACTGGGGTTCTGCTTTGAGGATGGCAATCTTCTTTTGGTCTATGATTTCCTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAATAAGAAAAATCCACTTGTGTTTGGTTGGACTGAGAGATTTAAGGTGGCAATGGGTGTTGCTGAAGCTTTGGAGTATCTGCATAATAATGATGGACAACCTGTGATCCATCGGGATGTGAAATCATCAAATATATTATTATCTGAGGATTTTGAACCTCAGCTTTCTGACTTTGGACTTGCTAAATGGGCATCAACCTCATCATCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACATGGCTCCTGAATACTTCATGTATGGTAAAGTAAATGATAAGGTTGATGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGGTGATTATCCAAAAGGTCAAGAGAGCCTTGTAATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGGTGTCACAATTGTTAGATCCTAATTTGGGTGATAAGTATGATCATGAAGAGATGGAAAGGATGGCCCTAGCAGCCACACTTTGTATCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATCTCAAAGCTCCTTGGTGGTGATGCTGATGTGATCAAGTGGGCAAGGCTAGAAGTTAATGCTTTAAAAGCACCAGATATGCTTGATGATGAAGCTTGTCCACCTTCTAATATTCTACAGTCACATCTTAATCTAGCACTGCTTGATGTGGAGGATGACTCGCTCTCCATGTGCAGTGTTGAGCAGAATGTCTCATTGGAGGACTACTTGAGAGGAAGGTGGAGCCGCTCCTCAAGCTTTGATTGA 1659 0.4051 MQEKGSGKYSDHSLAKVFMDSTEDIGKKSCFICAFTPALPDSSCHQSAEKFCGNSENSLAIVPAQTTDAGSSRKNLHGREVTELKPGWPLLHRTKLLDRQSSERSSLRQISVVQWAMRLPSRNLSYDSNYNHKTNNCAQYKDQFLDLDSKSGALVPVDPEIGIAASPERNSSSSIPKELEGLHEKYSSTCRLFKYQELLSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKNPLVFGWTERFKVAMGVAEALEYLHNNDGQPVIHRDVKSSNILLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYMAPEYFMYGKVNDKVDVYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPILNSGKVSQLLDPNLGDKYDHEEMERMALAATLCIRRAPRARPQMSLISKLLGGDADVIKWARLEVNALKAPDMLDDEACPPSNILQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD. 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02363 552 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 174 279 - -
Seca7g02363 552 PANTHER OS08G0249100 PROTEIN 75 486 IPR046958 -
Seca7g02363 552 SMART serkin_6 205 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02363 552 Gene3D Transferase(Phosphotransferase) domain 1 280 484 - -
Seca7g02363 552 Gene3D Phosphorylase Kinase; domain 1 169 279 - -
Seca7g02363 552 ProSiteProfiles Protein kinase domain profile. 205 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02363 552 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524
Seca7g02363 552 CDD STKc_IRAK 211 470 - -
Seca7g02363 552 SUPERFAMILY Protein kinase-like (PK-like) 186 474 IPR011009 -
Seca7g02363 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Seca7g02363 552 FunFam Putative receptor-like serine/threonine-protein kinase 280 492 - -
Seca7g02363 552 Pfam Protein kinase domain 209 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02363 Seca-Chr7 55711885 55716092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02363 192 472 Trihelix Transcription Factor Family AT1G68690 46.503 2.20e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Seca7g02363 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02363 - - lja:Lj1g3v0268780.1 883.248