Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02354 ATGCTAATTAACAATGTCAGATCAGCCATTGGAGATAGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCATGTACTGCAGGGTTTGTATTGCAGTGGCGCCTTGCCGTTGTCCTTGTAGTTGTGTTCCCTGTTGTGGTTATAGCCACTGTTTTACAGAAAATGTCCATGATTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCCACACAACTAGTGGTTCAATTCCAATCAGTTTGCACTGTTGACTTGTCAGCTTTAAGGCCCTTGCCTATTGATGTCCAAGGTGTGCAGGCAGCTCATTGTGTTGTGTATTTGATTCAACCATTTGATGGTTAA 354 0.4379 MLINNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLAVVLVVVFPVVVIATVLQKMSMIGFSGDLEAAHAKATQLVVQFQSVCTVDLSALRPLPIDVQGVQAAHCVVYLIQPFDG. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02354 117 Gene3D ABC transporter type 1, transmembrane domain 3 87 IPR036640 GO:0005524|GO:0016020
Seca7g02354 117 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Seca7g02354 117 SUPERFAMILY ABC transporter transmembrane region 3 80 IPR036640 GO:0005524|GO:0016020
Seca7g02354 117 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 3 87 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g02354 117 Pfam ABC transporter transmembrane region 3 79 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02354 Seca-Chr7 55462334 55463051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02354 4 77 Calmodulin-binding Proteins AT2G36910 91.892 1.04e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02354 K05658 - qsu:112025700 109.383