Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02350 ATGTTGAAGACGAAGGTTTTCCAAGGCGCGAATGTGTTCATGTCGCGAAACCTAGTGCCGCCTGAAGTGTTCGACGCGCTCCAAGACGCCGTTAAAGATAACGGCGCCCAAATCCACCTTTGCTGCGATCCTTCCCGCAATGGCCCCAATGATTACCATATAATTTCTTGCAGTAAACACGAGAAGTTTGAGGATCTTAAATCCAAGGGCTGTAAATTGCTCGGTCCTAGATGTGTTCTTTCATGTGCTAAAGAACGAAGACCTCTGCCTAAACAAAGCTTCACTTGTTGCCTTGCAATGGATGGTGTCAAAGTACTTGCCTCTGGCTTTGATGCGGATGAGAAGGTTAAGATAGAAGAGTTGGTGACTGAAATGGGGGGAGTTCTACACACTAAAGCGTCACTGGATTTGAACTTTGTTGTTGTGAAAAATGTTTTAGCTGCAAAGTACAAGGTCTGGTACATGAAGTTTTTGTTCTCTATTTCCATCTTATTCTTAATTATCACATACGTTTTTATTGTTACAGGTAAGTGGGCCTTTCTTTCTTATTATGTTCCATTTTATTCCTATTCCTAA 576 0.4201 MLKTKVFQGANVFMSRNLVPPEVFDALQDAVKDNGAQIHLCCDPSRNGPNDYHIISCSKHEKFEDLKSKGCKLLGPRCVLSCAKERRPLPKQSFTCCLAMDGVKVLASGFDADEKVKIEELVTEMGGVLHTKASLDLNFVVVKNVLAAKYKVWYMKFLFSISILFLIITYVFIVTGKWAFLSYYVPFYSYS. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02350 191 ProSiteProfiles BRCT domain profile. 2 96 IPR001357 -
Seca7g02350 191 Gene3D BRCT domain 23 94 IPR036420 -
Seca7g02350 191 SUPERFAMILY BRCT domain 59 156 IPR036420 -
Seca7g02350 191 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 8 152 - -
Seca7g02350 191 Gene3D BRCT domain 98 180 IPR036420 -
Seca7g02350 191 Pfam twin BRCT domain 104 151 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02350 Seca-Chr7 55314267 55315433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02350 1 155 Core DNA Replication Machinery Family AT1G77320 71.613 8.55e-73 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02350 K10728 - gmx:100804966 286.189