Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02345 ATGGATAAGCAAGTGATACTCCTACCTCTCCTCATGTTCCTCTTCACCAATTTCATATCTTATGCTTCATCTTCCTCATGTCCCATGGATCTCAGCTATGTTGAGACTTTTCCTTGGGACACATCAACCTGCAGAGGTCCAATTGATACACAGCACTGTTGCCAAGCCCTTCTTAGCCTCTTTGGTATAGGGCTTGCTCAACACCTCAAAGAAACTTTTCAGTTTCAACTTTCTGATGAAAACACTTCCACCACTTGTTTATCTGATTTCAAAATCAAGCTTGCAGCTTTATCAATAGACCCATCTTTGGTCCCTTCTTGCTTCCAAAACTCTACCCAATTTGTCACTAACCCTTCCAATTGTGCAGGTATTAATAACACACAAGATTGGAAGCAAAAGGTTGGCATGATGAGTCCTTTAGACACATCTTGCCAAGGGGACATGAGTTCTCAAACTCGTTGCAGTATTTGCACTGATGCTGGCCTTAAAGTGACTTCACAGCTGAATAGTATTGACCCAAATGCCACAAAGTGTTTTTATTTCTCAATCTTGTATGCTGCAGCTGTTGTTAATCAGTTTGGTCCAACAGATGTAGGCACTGCTGGTTGCATATTAGGCATGCCACTGGCTTCAAAAGGGTCATCAAACAGAGCACAAGTGTTGAAAATTGTTTTTGGGTTATTGGGTGCTCTTATTGGTGTTCTACTTGCTTTTGCATTGATAATCATGTACAGGAAGTGGGATAAGAAAAGGAAGGAAGATCTTTATCACAGAAATGTTGAAAACAGTGTCAGGGAAAGTGTTTTGCCTAATGCTGGTGCAAAATGGTTTCATATATCAGAGCTTGAAAAGGCAACAAATAAATTTGCACAGAAGAATGTGATTGGTCAAGGTGGTGATGGGATTGTGTACAAAGGGACCCTTTCAGATGGAACTGTGGTAGCAGTTAAGGAAATGCTTGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAGGTGGAGATTATAAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTAGGGGTTGTTGTGTTTCAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTAGTTTATGATTTTATGCCTAATGGTAGCCTTAGTTACCAATTGTCTCTTACTGGGGCTAATAGGCTAACTTGGCCACAGAGAAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACTAACATACTTTTGGATTCCAAAATGAAAGCTAAAGTAGCAGATTTTGGGTTAGCAAAGCAAGGTAATGAAGGGCAGTCTCATCTTACAACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTATATGGTCAACTAACAGACAAAAGTGATGTCTATAGTTTTGGTATTGTGATTCTTGAGATCATGAGTGGAAGGAAAGTGCTTGATACTATGAATTCATCTGTTGTTCTAATCACAGATTGGGCATGGTCACTTGCAAAATCAGGAAATGTGGATGAAATTCTTGATCAGTCAATAAGGAAAGAAGGGCCAGAAAAAATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGCTCATGCATTGGTGGCTTTAAGGCCTACTATTGCTGAGGCACTCAAGATGTTAGAGGGTGACATTGACATTCCCAATTTACCAGACAGGCCAGTACCATTGGGTCATGAGTCCTTTCAATCTTCTCTTTTGTATGGTTTGCAAAGAAGTGGAAGATCAACGCCATATTTTTCATCTTATTCAACAAGTATGAGCACAATATAG 1836 0.3987 MDKQVILLPLLMFLFTNFISYASSSSCPMDLSYVETFPWDTSTCRGPIDTQHCCQALLSLFGIGLAQHLKETFQFQLSDENTSTTCLSDFKIKLAALSIDPSLVPSCFQNSTQFVTNPSNCAGINNTQDWKQKVGMMSPLDTSCQGDMSSQTRCSICTDAGLKVTSQLNSIDPNATKCFYFSILYAAAVVNQFGPTDVGTAGCILGMPLASKGSSNRAQVLKIVFGLLGALIGVLLAFALIIMYRKWDKKRKEDLYHRNVENSVRESVLPNAGAKWFHISELEKATNKFAQKNVIGQGGDGIVYKGTLSDGTVVAVKEMLDLETKGDEEFCYEVEIISKIKHRNLVALRGCCVSSDNLKGKRRFLVYDFMPNGSLSYQLSLTGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTDKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWSLAKSGNVDEILDQSIRKEGPEKIMERFVLVGILCAHALVALRPTIAEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGLQRSGRSTPYFSSYSTSMSTI. 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02345 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Seca7g02345 611 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 583 - -
Seca7g02345 611 CDD STKc_IRAK 295 564 - -
Seca7g02345 611 Pfam Protein kinase domain 290 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02345 611 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 370 570 - -
Seca7g02345 611 ProSiteProfiles Protein kinase domain profile. 289 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02345 611 SMART serkin_6 289 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02345 611 FunFam Receptor-like serine/threonine-protein kinase At4g25390 254 369 - -
Seca7g02345 611 Pfam SPARK 23 178 IPR043891 -
Seca7g02345 611 SUPERFAMILY Protein kinase-like (PK-like) 274 581 IPR011009 -
Seca7g02345 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Seca7g02345 611 Gene3D Phosphorylase Kinase; domain 1 250 369 - -
Seca7g02345 611 Gene3D Transferase(Phosphotransferase) domain 1 370 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02345 Seca-Chr7 55072460 55074295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02345 16 592 Receptor kinase-like Gene Family AT1G11050 51.736 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Seca7g02345 Pkinase 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02345 - - mtr:25482441 1000.35