Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02334 ATGTCAACACAGAATCGCTGTCATTCGTCGTTTTCTTCCTCAACGACGTCGTCTCTCGCGAAACGAAATCCATCGTCGTCGTCGACGTTGGCTAAGAAGAGAGCGCCTCTCACCAACCTCACCAATCAGAGGAATGCGCTGCACGCTCCTTCCCGCAACTCGGGTCCTTCCTCTACATTGGTACCACCATGTTCAACTAAAATTGCCAAGAGCAAGAAAGGGTCTCCTGTCTGCACCAGCATCACTAGGTCAGCAAGTTGCGGGAACAAATTGCAGAATGTGAAACCAAGTGTAGTTGTTTTTCCAAAGGCTACTTCTGTCCCACAAAAGAATGTTGCTGCTCCCACAGTTGCCACTGTCCCTTTGCCTGTTCCAACCATGAAGGATGTTACTCCTTGTGAATCATCAGATGCAATGTCCATTTCTATGGATGACAGTACAGTGTCTTCTTGTGGTTCTATCAAGAGTCCTGAGGTTGTATACCTGGACAACAGTGAGATTTCAGCTGTTGATTCAATTCAGAGAAAGATATTCAGCAATTTGAACATATCTGATACTACAGAGCCTGCAGGTAACATCTATAGTAAAGACATAATTGTTGGGTTGGAAAGAGAGGATAAGGTTGCTGATATTGATGATAATTACACGGATCCGCAGCTTTGTGCAACCTATGCCTGTGACATCTACAAGCACCTTCGTGCATCTGAGGCAAAGAAAATGCCTTCCCCAGACTTCATGGAGAGATTTCAGAAGGACATAAATGTCAGCATGCGCGCTATATTGATTGACTGGCTTGTGGAGGTGGCTGAGGAGTATAGGCTTGTACCTGATACCTTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCAATGAATAGGCAAAAATTACAATTACTTGGTGTTGCGTGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTAGAGGAATTTTGTTTTATAACTGATAACACGTACGTCAAAGAAGAGGTTTTGCGAATGGAATCTGCTGTCTTGAATTGTCTTAAGTTTGAAATGACAGCCCCAACAACAAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGATGTCAACGAGGTCCCTTCACTGCAACTAGAGTGCTTGACCAACTATATTGCCGAATTATCTCTCTTGGAGTACAGTATGCTTTGTTATGCACCATCACTGATAGCAGCTTCTTCAATTTTCCTGGCCAAATTTATACTTTTCCCTTCAAAAAAACCATGGGTATGCATGCTGCTAACCACAAAATTTTCTATGCCATTTGTACACAAGGAAATGGTCTTTTGTATGATTGAATGGCTTATTGTTTCTGTTCTTTTTTTTTCTGCAATAGAATTCCACATTGCAGCATTACACTCTCTATCGGCCTTCTGA 1422 0.4248 MSTQNRCHSSFSSSTTSSLAKRNPSSSSTLAKKRAPLTNLTNQRNALHAPSRNSGPSSTLVPPCSTKIAKSKKGSPVCTSITRSASCGNKLQNVKPSVVVFPKATSVPQKNVAAPTVATVPLPVPTMKDVTPCESSDAMSISMDDSTVSSCGSIKSPEVVYLDNSEISAVDSIQRKIFSNLNISDTTEPAGNIYSKDIIVGLEREDKVADIDDNYTDPQLCATYACDIYKHLRASEAKKMPSPDFMERFQKDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEFCFITDNTYVKEEVLRMESAVLNCLKFEMTAPTTKCFLRRFVRAAQDVNEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASSIFLAKFILFPSKKPWVCMLLTTKFSMPFVHKEMVFCMIEWLIVSVLFFSAIEFHIAALHSLSAF. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02334 473 FunFam Mitotic cyclin 6 241 341 - -
Seca7g02334 473 SMART Cyclin_C_2 356 471 IPR004367 -
Seca7g02334 473 Gene3D - 231 428 - -
Seca7g02334 473 Gene3D - 242 354 - -
Seca7g02334 473 SUPERFAMILY Cyclin-like 216 353 IPR036915 -
Seca7g02334 473 FunFam Cyclin superfamily protein, putative 351 425 - -
Seca7g02334 473 SMART cyclin_7 360 448 IPR013763 -
Seca7g02334 473 SMART cyclin_7 263 347 IPR013763 -
Seca7g02334 473 Pfam Cyclin, N-terminal domain 227 353 IPR006671 -
Seca7g02334 473 MobiDBLite consensus disorder prediction 1 65 - -
Seca7g02334 473 PIRSF Cyclin_A_B_D_E 1 448 IPR046965 GO:0016538|GO:0044772
Seca7g02334 473 Pfam Cyclin, C-terminal domain 356 425 IPR004367 -
Seca7g02334 473 PANTHER CYCLINS 175 427 IPR039361 -
Seca7g02334 473 SUPERFAMILY Cyclin-like 356 428 IPR036915 -
Seca7g02334 473 CDD CYCLIN_AtCycA_like_rpt1 217 352 - -
Seca7g02334 473 ProSitePatterns Cyclins signature. 258 289 IPR006671 -
Seca7g02334 473 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02334 Seca-Chr7 54682518 54686974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02334 19 424 Core Cell Cycle Gene Families AT1G44110 57.212 5.97e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02334 K06627 - zju:107421028 545.043