Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02327 ATGGACTTCACATTGGACTTGAATCCTCTTAGTGATGACAAAAATGAAATAATTGAAGATTGCCTTCCAAACATGGAGGAGGAGGAGGGCGATACTGCTGTGTATAGTAGCTACATTGAGGCAGCTGAGAAATCTATTTCTACAAAGATCATATTTGCGGAGAAAAACTTCACTGTTTTGGATGAATCTAACATCAAGCGGCTTCAAGAGGTCGATATCAATCAGGTTTCATATGTTCTTTCAATATCAAAATTTGCTGCTTGCCTTTTGCTCTGTCACTGTGAGTGGAACGTGACTAAAGTGCTTGAAGCATGGATTGATAATGAAGAAAGAGTTCGCAACGCTACAGGGTTGCTTAAACAGCTTCAGGTAAATTTTTCCAGCTCAGAAATTTTCATGTGTGGGATCTGTTTCGAAACCCTTTGTGGTGATAAGATTAGGTCAGCAGGGTGTGGCCATCCATTTTGTATGATTTGTTGGAAGCACTATGTGGATACAAAGTGA 504 0.3988 MDFTLDLNPLSDDKNEIIEDCLPNMEEEEGDTAVYSSYIEAAEKSISTKIIFAEKNFTVLDESNIKRLQEVDINQVSYVLSISKFAACLLLCHCEWNVTKVLEAWIDNEERVRNATGLLKQLQVNFSSSEIFMCGICFETLCGDKIRSAGCGHPFCMICWKHYVDTK. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02327 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 167 IPR013083 -
Seca7g02327 167 SUPERFAMILY RING/U-box 128 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02327 Seca-Chr7 54435162 54435665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02327 54 166 ARIADNE family AT1G65430 46.903 1.90e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02327 K11968 - qsu:111995178 129.413