Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02316 ATGGCGTCAGAGCTTCAATTGCCACCTGGATTCAGATTCCATCCCACCGATGAGGAACTCGTCTTGCACTATCTCTGCCGGAAATGCGCGTCACATCCAATCGCCGTTCCGATCATCGCTGAAATCGATCTTTACAAGTATGATCCATGGGACCTTCCAGGAATGGCCTTGTACGGAGAGAAGGAGTGGTATTTCTTTTCTCCAAGGGACAGGAAATATCCAAATGGTTCGAGGCCGAACCGGGCTGCTGGTACTGGATACTGGAAGGCAACTGGAGCAGATAAACCAATTGGCCAGCCGAAACCGGTTGGAATAAAAAAGGCTCTAGTGTTTTACGCAGGGAAAGCACCTAAAGGAGAGAAAACTAACTGGATTATGCATGAATACCGTCTTGCAGATGTGGATCGTTCGGTTCGCAAAAAGAACAGTTTGAGGCTTGATGACTGGGTGCTTTGTCGCATTTACAACAAGAAAGGCGTGGTGGAGAAGCAGCCAAGCGTTAACTGCAAAATCGAATGCTCAGAAACAGAGGACATGAAGCCGGAGATTCTCACAACTGCCGGAGCATATCTTCCACCGCCTCCTCCTCCGCCAGCGACGGTGACGGACTGCGTTTACTTCGACACCTCCGACTCAGTCCCGAAGCTTCACACGACGGACTCTAGCTGCTCCGAGCACGTGGTGTCGCCGGAGTTCGCTAGCGAGGTGCAAAGCGAGCCCAAGTGGAACGAGTGGGACAAAAAGAATAATAATAGCCTTGACTTTTCGTATAATTACCTGGATGCCACTCTCAACAGTGGTGGTAACTTCGGTTCCCAGTTCCAGAGTGGCAATAATCAGATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCCAAGCCATTCTGA 888 0.5023 MASELQLPPGFRFHPTDEELVLHYLCRKCASHPIAVPIIAEIDLYKYDPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVVEKQPSVNCKIECSETEDMKPEILTTAGAYLPPPPPPPATVTDCVYFDTSDSVPKLHTTDSSCSEHVVSPEFASEVQSEPKWNEWDKKNNNSLDFSYNYLDATLNSGGNFGSQFQSGNNQMSPLQDIFMYLSKPF. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02316 295 PANTHER NAC TRANSCRIPTION FACTOR 56 7 215 - -
Seca7g02316 295 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Seca7g02316 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Seca7g02316 295 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Seca7g02316 295 FunFam NAC transcription factor 16 161 - -
Seca7g02316 295 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02316 Seca-Chr7 54034865 54037206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02316 1 295 NAC Transcription Factor Family AT1G01720 73.000 1.19e-157 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g02316 NAM 9.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02316 - - gmx:100805768 479.944