Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02298 ATGAAGTCGCTTGAAATTTTTAAATTTGACAATGATGATGATTCTTGTTCGGAACTTTGCTCAATTTGTCTTGAGGGGTTGGGCAGTGGTGGATCCGAGTCGAAAGTTGTTCGCACCATGTGTTTCCATGTTTTTCATGAAAAGTGCATTTCTCAATGGCTTCTGAGTTGTAACCACACCAATCAATCATGTTCATTCCCATTGTGTCGTTGCGAAATTGCTTTTTGA 228 0.3947 MKSLEIFKFDNDDDSCSELCSICLEGLGSGGSESKVVRTMCFHVFHEKCISQWLLSCNHTNQSCSFPLCRCEIAF. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02298 75 ProSiteProfiles Zinc finger RING-type profile. 20 70 IPR001841 -
Seca7g02298 75 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 74 IPR013083 -
Seca7g02298 75 Pfam Ring finger domain 20 70 IPR001841 -
Seca7g02298 75 SUPERFAMILY RING/U-box 3 73 - -
Seca7g02298 75 PANTHER SI:CH211-59O9.10 2 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02298 Seca-Chr7 53822071 53822298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02298 17 73 C3H Transcription Factor Family AT4G12190 43.860 1.56e-09 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02298 - K11985 lang:109327943 67.3958