Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02294 ATGTCAAAGTCTCCCTCTCCTGATCAACAGCAGTCCATTTATTCTGCTCCTCAGCCTATGGAATTCAATGAGGCAACAGGAATGGACGATCCAGAATCTACAATGGCAACAGTTGCTAATTTTGTGGAGCAACTTCATGCTAACTTATCATCACCACTTGAGAAAGAGCTTATTACATCACGCTTGCTAGGTATTGCCAGGAGAAGAAAGGATGCTAGAACGCTTATCGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAACATTCTCAGAAATGGAACCCCTCTTGCAAAAGTTAATGTTGCTTCCACTCTCAGTGTCCTATGCAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTGTCCCACCATTACTGTCGCTTTTAAAAAACGAATCGACTGATGCCAGGAAGGCAGCAGCAGAAGCAATTTATAAAGTTTCCTCAGGTGGTCTTTCAGATGATCGTGTTGGTATGAAAATTTTTGTTACAGAAAGTGTAGTTCCAACCTTATGGAATCAACTAATTCCAAAGAACAAGGAAGACAAAGTCGTGGAGGGTTTTATTACTGGAGCATTGAGAAATCTGTGTGGGGACAAAGATGGCTATTGGAAAGCAACATTAGAAGCCGGAGGTGTGGATATTATTGTGGGTCTCTTGTCTTCAGATAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCTCGGTTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCAGGAGCAGTCCAAGCTTTACTTCGTCTTGTTGGTCAGGAAAACGATATTTCTGTACGGGCTAGTGCTGCTGATGCCCTAGAGGCCCTTTCTTCAAAGTCTACCAAGGCTAAAAAGGCTATTGTTAGTGCAGATGGTGTGCCAATCCTTATTGGAGCTATAGTTGCTCCTTCTAAAGAGTGCATGCAAGGTGATGGTGGCCAGGCTCTGCAGGAGCATGCAACTCGAGCTTTAGCCAACATCTATGGTGGCATGTCTGCTTTAATACTATATCTTGGAGAACTTTCCCGTTCTCCTCGCCTTGCTGCACCAGTTAGTGATATAATTGGTGCTCTTGCGTATACACTTATGGTCTTCGATGAAAAACTTGATGTTGATAAGAAACATTTTGATGCAACTCAGATAGAGGATATTCTAGTAACCCTTTTAAAGCCTCGAGACAACAAGCTTATTCAAGAGCGTGTCCTTGAGGCCATGGCCAGCCTTTATGGAAATGTCTGTCTCTCGAAGTGGCTCATTCAGGCAGATTCAAAAAAGGTTCTTATTGGACTTATAACTATGGCTGCCCCTGATGTGCAAGAGTATCTGATACATTCATTGACAAGCTTGTGTTGTGATAAGATTGGAATATGGGAGGCCCTAAAAAAAAGAGAAGGTATCCAATTACTGATATCATTGGTGGTATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAGTTGCTAGCAATCTTAACTAACCAGGTTGATGACAGCAAGTGGGCAATCACAGCTGCTGGAGGGATTCCACCATTGGTGCAGTTATTGGAGACAGGATCACAGCAAGCAAGAGAGGAAGCAGCTAATGTTCTGTGGAGTTTGTGCTGCCACAGTGAAGATATCCGCACTTGTGTTGAAAGTGCTGGAGCCATCCCAGCATTTTTGTGGCTTCTTAGGAGTGGTGGGCCAAAAGGACAAGAAGCTTCTGCTATGGCACTTACAAAGCTTGTCCGAGTAGCTGATTCTGCCACAATTAATCAGCTATTAGCATTGCTCTTAGGGGATTCTCCAAGCTCGAAAGCCCATATAATTCGAGTTTTGGGTCATGTACTTTCTATGGCTTCACAGAAGGATCTCCTTCAAAAGGGTTCTGCAGCTAATAAAGGCCTGAGATCTCTTGTTCAGGTTCTTAATTCATCAAATGAGGAAACCCAAGAATATGCAGCTTCAGTCCTAGCTGATTTATTTAACACAAGACAAGACATTTGTGATAGCCTCGCAACTGATGAGATTGTGCTTCCTTGCATGAAGCTTTTGACTAGCAAAACACAAGTTGTTGCCACTCAGTCAGCTCGAGCATTAAGTGCTCTGACCCGTCCAACAAAGAGCAAAGCTGCAAATAAGATATCTTATATTGTAGAGGGTGATGTTGAGCCACTAATCAAGTTAGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCACTGGCCAATCTTCTCTTTGATCCTTTTATTGCTGCTGAGGCTCTAGCTAAAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGCAGAAGGAACCTTGGAAGGTAAACAAAATGCATCCCGTGCACTTCATCAGTTATTAAAGCATTTTCCAGTAGGTGATGTGCTCAAGGGGAATGCTCAATGCCGTTTCACTGTGCATGCACTTGTTGATTCATTAAGAGATATGGATATGGATGGAACTGATGCAGCAGATGCTTTAGAAGTAATTTCACTGCTAGCCAGGACTAAACGGGGTGTCAACTTCACTTACTCTCCATGGTCAGCTCTGGCTGAAATACCGTCAAGCTTAGAACTTCTTGTCTGCTGCTTGGCTCAGGGGCCTTCCCTTGTGCAAGATAAAGCAATTGAAATTCTGTCTAGGCTTTGTGGAGATCAGCCAGCTGTTCTTGGTGATTTGTTATTTGCCAATTCAAGATCTATGGCTTCATTGGCTAATAGAATAATAAACTCCTCCAGTTTAGAAGTAAAAGTTGGGGGGGCTTCCTTACTAATTTGTGCTACAAAGGAGAAGAAAGGACTTTCAATGGATTCACTCGACACTTCTGGGTATTTGAAACCATTAATAGATTCTTTAGTTGATATGGTGAAGCAGAGTTGTCTCTGTTCTTCATTAGATATTGAAGCTCTCACTCCTAGAGGTTTCATGGAGAGAAATGCATTTCAAGAAGTTGATGAGTTTGATATTCCTGATCCAGCCACAGTCTTGGGAGGTACTGTTTCCCTATGGTTGCTCTCAATTATTGCTTCTTTTCATATGAAAAGCAAGCTCGCAATTATGGAAGCTGGTGGACTCGAAGTTCTCTCTGACAAACTTACGAGACATACTTCAAATCAACAGCAGGCAGAATATGAGGATACAGAAGGAATATGGATTAGTGCTTTGCTCTTGGCCATTTTATTTCAAGATAAAAACATCATTCTATCACCTACAACAATGCGCATTATACCTTCTATCACGCTTCTGCTCAGATCTGATCAAGTAATTGATAAATTTTTTGCCGCCCAGGCTATGGCTAGTCTTGTTAGTCATGGTAATAAGGGAATAGATCTTACCATTGCAAATTCCGGAGCAGTTGCTGGATTGATAACTATTATTGGGCATATAGAGTCAGAGATGCCAAATCTCATGGCTTTATCAGAAGAATTTTCTTTGGTGCGAAACCCTGATCAAGTTGTTTTAGATCACCTTTTTGAAATTGAAGATGTTAGATTGGGATCTACTGCACGGAAATCCATACCCCTCTTAGTGGATCTCTTGAGACCAATACCGGAAAGACCGAGTGCTCCACCAGTTGCTGTTAGACTCTTGATATCCATTGCAGATGGAAGTGATACTAATAAATTAATCCTGGCTGAAGCTGGAGCTCTAGAAGCTTTGAACAAATACCTATCTTTGAGCCCTCAAGACTCGACCGAAACCGCTATATCCGAGTTATTGAGAATATTATTCTACAATTCTGACCTTATTAAACATGAAGCATCAGCAAGTTCATTGAACCAACTCATAGCTGTTTTGCGTCTTGGGTCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTAATGAACTTTTTGATGCCGATAACATTAGAGACTCAGAATTAGCTAAACAGGCCATTCAACCATTGGTTGACATGCTTAACACAACATCAGGGAGCGAGCAGGAGGCTGCTCTCATGGCCTTGATCAAGTTAACTTCAGGAGATTCTTCAAAAGCATGTCTTTTTACTGATGTCGATGGGAACCCACTTGAAAGTTTGTGCAAAGTATTGTCTTCTGCTTCATCCTTAGAACTGAAGAGCCATGCTGCACAACTTTGCTTTGCTCTTTTTGGTAATAGCAAGATCAGAGCAAATCCAGTTGCCTCAGAATGCCTAGAACCCCTTATATCGCTGATGCAGTCTGGTTCTGGGACAGCAGTAGAATATGGGGTTTGTGCTTTTGAAAGATTGTTGGAAGATGAACAACAGGTAGAGCTTGCAGCAGCCTATAATGTTGTTGATCTCCTTGTCAGCTTGGTTTCTGGTACGAACTATCAGCTTATTGAGGCTACCATATCTGCTCTCATCAAATTGGGAAAAGACAGGACTCCAAGCAAACTTGACATGGTTAAAGCTGGCATTATTAATAATTGTCTCAAGCTACTCCAATCAGCACCTAGCTCATTATGCTCCACAATAGCTGAGCTGTTTCGCATTTTAACTAATACTAATGCAATTGCTAGAAGTTCAGATGCTGCTGAAATTGTAGAACCCCTTTTCCATGTTTTTCTCCGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCCTACAAGCACTTGTAAATATATTGGAGAAACCACAAAGTCTTGCAACCTTGAAGCTTACTCCTAGCCAAGTCATTGAACCCTTGATTTCCTTTCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAGCTGTTATCTCATCTTCTTGCACAGGAACATTTTCAGCAAGATATTACAACAAAGAATGCAGTAGTGCCACTTGTACAGCTTGCAGGAATTGGAATATTAAACTTACAGCAAACAGCAATTAAAGCATTGGAAAAAATTTCCACAAGCTGGCCAAAAGCTGTTGCTGACGCGGGAGGTATTTTTGAGCTTGCAAAAGTTATTATTCAAGATGACCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTATTACGTTCCAATGCTGATTACTATTTTAAAGTTCCTGTGGTGGTTCTTGTAAAACTCTTGCACTCAACACTTGAGAGTACAATTAGCATAGCCCTTAATGCTTTAACAGTTCATGAAAGAAGCGATGCTTCAAGTGCTGAACAGATGATGGAAGCTGGAGTTATAGATGCTCTGTTGGACCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGTAGATTACTTGAAGCTTTATTTAACAATGTAAGAGTACGAGAGATGAAGGTGTCAAAGTATGCTATAGCGCCTTTGTCCCAGTATCTCTTAGATCCACAAACCAGATCGCAGTCTGGAAAGCTTCTTGCTGCTTTAGCTCTGGGAGATCTTTCCCAGCATGAAAGACATGCTAGAGCTAGTGGCTCTGTATCTGCATGTCGTGCGCTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGACGATGGTGGCTATATGTGCATTGCAAAACTTTGTCATGAACAGCAGGACCAATAGACGAGCTGTTGCAGAAGCTGGGGGCATACTGGTGATTCAGGAATTGCTACTGTCTCCAAATACAGAAATTGCTGGACAAGCAGCATCATTGATCAAATTTTTGTTTTCTACCCACACTCTGCAAGAATACGTGTCAAATGAGCTGATCAGATCTTTGACAGGTACATTGTTGTTAAAAAATTTGTATTTCATTATATTGTTGGTTGCAGCTGCACTGGAAAGAGAGTTATGGTCAACCGCCACCATCAATGAGGAGGTTTTGAAAACTCTGCATATGATATTCATGAACTTCCCTAAGCTCCACATATCTGAAGCAGCAACCCTTTGCATTCCTCATTTGGTAGGAGCACTTAAGTCTGGTGGTGAAGTGGCTCAGGACTCTGTACTTGACACCTTTTGTTTGCTAAAACAATCTTGGTCAACCATGCCAATAGATATAGCAAAGTCTCAAGCTATGATTGCTGCTGAAGCCATACCCATCTTGCAAATGCTCATGAAAACCTGCCCGCCAAGTTTCCATGAGAGGGCAGATACTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAGCAAACTATGGGAAGCACTAATGCATTCTGCCGGTTGACAATAGGCAATGGTCCTCCGAAACAAACCAAGGTAGTGAATCATAGTACTTCTCCAGAATGGAAGGAAGGATTCACATGGGCATTTGATGTACCACCAAAGGGCCAAAAGCTCCATATCGTATGCAAAAGCAAGAATACTTTCGGGAAGACAACTCTTGGAAGAGTCACTATCCAAATCGATAAAGTTGTGACAGAAGGGGTTTATAGTGGTTTATTCAGTCTTAATCATGATGGCAACAAAGATGGTTCTTCTCGAACACTTGAAATTGAGATTATATGGTCCAACAGGATTTCTAACGATGACAATTGA 6459 0.4186 MSKSPSPDQQQSIYSAPQPMEFNEATGMDDPESTMATVANFVEQLHANLSSPLEKELITSRLLGIARRRKDARTLIGSHAQAMPLFINILRNGTPLAKVNVASTLSVLCKDEDLRLKVLLGGCVPPLLSLLKNESTDARKAAAEAIYKVSSGGLSDDRVGMKIFVTESVVPTLWNQLIPKNKEDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVQALLRLVGQENDISVRASAADALEALSSKSTKAKKAIVSADGVPILIGAIVAPSKECMQGDGGQALQEHATRALANIYGGMSALILYLGELSRSPRLAAPVSDIIGALAYTLMVFDEKLDVDKKHFDATQIEDILVTLLKPRDNKLIQERVLEAMASLYGNVCLSKWLIQADSKKVLIGLITMAAPDVQEYLIHSLTSLCCDKIGIWEALKKREGIQLLISLVVLSSEQHQEYSVQLLAILTNQVDDSKWAITAAGGIPPLVQLLETGSQQAREEAANVLWSLCCHSEDIRTCVESAGAIPAFLWLLRSGGPKGQEASAMALTKLVRVADSATINQLLALLLGDSPSSKAHIIRVLGHVLSMASQKDLLQKGSAANKGLRSLVQVLNSSNEETQEYAASVLADLFNTRQDICDSLATDEIVLPCMKLLTSKTQVVATQSARALSALTRPTKSKAANKISYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPFIAAEALAKDVVSALTRVLAEGTLEGKQNASRALHQLLKHFPVGDVLKGNAQCRFTVHALVDSLRDMDMDGTDAADALEVISLLARTKRGVNFTYSPWSALAEIPSSLELLVCCLAQGPSLVQDKAIEILSRLCGDQPAVLGDLLFANSRSMASLANRIINSSSLEVKVGGASLLICATKEKKGLSMDSLDTSGYLKPLIDSLVDMVKQSCLCSSLDIEALTPRGFMERNAFQEVDEFDIPDPATVLGGTVSLWLLSIIASFHMKSKLAIMEAGGLEVLSDKLTRHTSNQQQAEYEDTEGIWISALLLAILFQDKNIILSPTTMRIIPSITLLLRSDQVIDKFFAAQAMASLVSHGNKGIDLTIANSGAVAGLITIIGHIESEMPNLMALSEEFSLVRNPDQVVLDHLFEIEDVRLGSTARKSIPLLVDLLRPIPERPSAPPVAVRLLISIADGSDTNKLILAEAGALEALNKYLSLSPQDSTETAISELLRILFYNSDLIKHEASASSLNQLIAVLRLGSRNARYSAARALNELFDADNIRDSELAKQAIQPLVDMLNTTSGSEQEAALMALIKLTSGDSSKACLFTDVDGNPLESLCKVLSSASSLELKSHAAQLCFALFGNSKIRANPVASECLEPLISLMQSGSGTAVEYGVCAFERLLEDEQQVELAAAYNVVDLLVSLVSGTNYQLIEATISALIKLGKDRTPSKLDMVKAGIINNCLKLLQSAPSSLCSTIAELFRILTNTNAIARSSDAAEIVEPLFHVFLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLRSNADYYFKVPVVVLVKLLHSTLESTISIALNALTVHERSDASSAEQMMEAGVIDALLDLLRSHHCEEASGRLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHERHARASGSVSACRALISLLEDQPTEEMTMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEIAGQAASLIKFLFSTHTLQEYVSNELIRSLTGTLLLKNLYFIILLVAAALERELWSTATINEEVLKTLHMIFMNFPKLHISEAATLCIPHLVGALKSGGEVAQDSVLDTFCLLKQSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPKQTKVVNHSTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKTTLGRVTIQIDKVVTEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDN. 2153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02294 2152 Gene3D - 1346 1605 IPR011989 -
Seca7g02294 2152 Gene3D - 370 629 IPR011989 -
Seca7g02294 2152 SMART arm_5 544 584 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1544 1585 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 287 336 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 111 151 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 502 542 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 244 285 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1207 1247 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 710 750 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1709 1750 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 158 200 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1417 1457 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1835 1875 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1289 1330 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 623 663 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 1376 1416 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 751 791 IPR000225 GO:0005515
Seca7g02294 2152 SMART arm_5 201 242 IPR000225 GO:0005515
Seca7g02294 2152 SUPERFAMILY ARM repeat 1588 2022 IPR016024 -
Seca7g02294 2152 Gene3D - 630 976 IPR011989 -
Seca7g02294 2152 Gene3D - 1002 1144 IPR011989 -
Seca7g02294 2152 ProSiteProfiles C2 domain profile. 2005 2122 IPR000008 -
Seca7g02294 2152 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Seca7g02294 2152 SUPERFAMILY ARM repeat 1177 1568 IPR016024 -
Seca7g02294 2152 Gene3D - 29 156 IPR011989 -
Seca7g02294 2152 Gene3D - 157 365 IPR011989 -
Seca7g02294 2152 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2023 2129 IPR035892 -
Seca7g02294 2152 MobiDBLite consensus disorder prediction 1 19 - -
Seca7g02294 2152 Gene3D - 1164 1345 IPR011989 -
Seca7g02294 2152 SMART C2_3c 2025 2121 IPR000008 -
Seca7g02294 2152 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 17 2146 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Seca7g02294 2152 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Seca7g02294 2152 Gene3D C2 domain 2026 2150 IPR035892 -
Seca7g02294 2152 SUPERFAMILY ARM repeat 319 479 IPR016024 -
Seca7g02294 2152 SUPERFAMILY ARM repeat 855 1119 IPR016024 -
Seca7g02294 2152 Pfam C2 domain 2025 2124 IPR000008 -
Seca7g02294 2152 Gene3D - 1611 2025 IPR011989 -
Seca7g02294 2152 SUPERFAMILY ARM repeat 80 798 IPR016024 -
Seca7g02294 2152 MobiDBLite consensus disorder prediction 1 30 - -
Seca7g02294 2152 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Seca7g02294 2152 CDD C2 2026 2116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02294 Seca-Chr7 53713034 53724916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02294 473 714 U-box Gene Family AT2G23140 28.514 4.41e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02294 - - gmx:100796864 3665.93