Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02289 ATGAGGTTCCTTCGCAAGCGCATGAACACCAAACCCTCCCATGGTCCTATCCACTTCCGTGCTCCTGCCAAGATCTTCTGGCACACTGTTCGTGGAATGATACCACATAAGACAAAGCATGGGGAAGCTGCACTTGCTCGTTTGAAGAGAAGAGGACCTTGCTAG 165 0.5091 MRFLRKRMNTKPSHGPIHFRAPAKIFWHTVRGMIPHKTKHGEAALARLKRRGPC. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02289 54 PANTHER RIBOSOMAL PROTEIN L13 2 49 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca7g02289 54 SUPERFAMILY Ribosomal protein L13 2 49 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca7g02289 54 Pfam Ribosomal protein L13 7 49 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca7g02289 54 Gene3D Ribosomal protein L13 1 51 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02289 Seca-Chr7 53481018 53481182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02289 1 49 Cytoplasmic Ribosomal Protein Gene Family AT3G24830 91.837 1.11e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02289 K02872 - rcu:8264955 101.679