Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02282 ACCCCTGGTTTTTGCAATGATGTTGTAGCTGTCTTGAGAAATAAAAAATATAGTAACAATAAATCTACTCATGCAATAGCAGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTACAACGAGCCACGCCTTCTCATTCTAACTGATCCAAGAACAGATCATCAGCCCATTAAGGAAGGAGCTCTTGGAAATATATCAACTATTGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATGTTGGGATTCCTTCTAATAACAATGGAACACATAGCATTGGCTATCTCTTTTGGCTATTAGCAAGGATGGTAGTGCAGATGCGGGGTACTATTCGTTCAGGGAAAAAGTGGGACATAATGGTGGATTTATTCTTCTATAGGGAACCTAATGAAACCAAGCCACAAGAGGATTGA 429 0.4033 TPGFCNDVVAVLRNKKYSNNKSTHAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNISTIAFCDTDSPMRYVDVGIPSNNNGTHSIGYLFWLLARMVVQMRGTIRSGKKWDIMVDLFFYREPNETKPQED. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02282 142 Gene3D - 10 142 - -
Seca7g02282 142 PANTHER 40S RIBOSOMAL PROTEIN SA 15 142 IPR005707 GO:0003735|GO:0006412|GO:0015935
Seca7g02282 142 PRINTS Ribosomal protein S2 signature 84 98 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca7g02282 142 PRINTS Ribosomal protein S2 signature 46 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca7g02282 142 PRINTS Ribosomal protein S2 signature 63 74 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca7g02282 142 PRINTS Ribosomal protein S2 signature 21 38 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca7g02282 142 Pfam Ribosomal protein S2 33 109 IPR001865 GO:0003735|GO:0005840|GO:0006412
Seca7g02282 142 SUPERFAMILY Ribosomal protein S2 16 127 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02282 Seca-Chr7 53277802 53278554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02282 10 142 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 77.444 4.13e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02282 K02998 - gmx:100818292 226.483