Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02280 ATGGAGTTTGTGAATACCCAAAAGCTACAGCTACAACAGCATTTTCATGTATTAGTGGTAGATGATAGTGTCATAGACAGGAAGCTTTTGGAGAGGCTCTTGAGAGATTCTTCATGCAAAGCTACCTTTGTGGACTCTGGAGATAAGGCTCTGAAGTATCTTGGCCTGCTTGATGAACTTGATAATGCTTCCTCAATTTCTTCAGAAACATTGCAACAAGATGGAATCAAAGTGAATTTGATCATGACAGATTACTGCATGCCAGGGATGAGTGGCTATGATTTACTCAAAAGAATCAAGGTCAAAACAAAGTACTCATTCCCCATTATATTGCCAAAATGTTATCTTTGTTTTAATCTATATATATGA 369 0.3713 MEFVNTQKLQLQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKYLGLLDELDNASSISSETLQQDGIKVNLIMTDYCMPGMSGYDLLKRIKVKTKYSFPIILPKCYLCFNLYI. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02280 122 Pfam Response regulator receiver domain 17 111 IPR001789 GO:0000160
Seca7g02280 122 Gene3D - 2 112 - -
Seca7g02280 122 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 110 IPR045279 GO:0009736
Seca7g02280 122 ProSiteProfiles Response regulatory domain profile. 16 122 IPR001789 GO:0000160
Seca7g02280 122 SUPERFAMILY CheY-like 15 111 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02280 Seca-Chr7 53243043 53244234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02280 9 111 Response Regulator Gene Family AT2G41310 52.830 8.20e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g02280 Response_reg 5.8e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02280 K14492 - gmx:100790440 171.4