Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02273 ATGGCGTCTACCATAATCAGCAAGAAGGTGTTTGATTCAGAAGAAGCTTCGGCGATGGTTAGGGATCTGAGAGTGACGTTTGATTCTGCCAAGACTCGAAGCTACGAATGGAGAGCTTCTCAGTTGAAGGCCCTTATGGAGTTAACTGAAAAGCACGACAAAGAGATCGTTCGAGCTCTTCACTCTGACTTATCCAAATCTGAAACAGAATCCTTCATCCAAGAGGTACAATCTCGCTGTACTCTAAACTAA 252 0.4405 MASTIISKKVFDSEEASAMVRDLRVTFDSAKTRSYEWRASQLKALMELTEKHDKEIVRALHSDLSKSETESFIQEVQSRCTLN. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02273 83 PANTHER ALDEHYDE DEHYDROGENASE 14 77 IPR012394 GO:0006081
Seca7g02273 83 SUPERFAMILY ALDH-like 6 77 IPR016161 GO:0016491
Seca7g02273 83 MobiDBLite consensus disorder prediction 64 83 - -
Seca7g02273 83 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 78 IPR016162 GO:0016491
Seca7g02273 83 MobiDBLite consensus disorder prediction 66 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02273 Seca-Chr7 53147233 53147484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02273 11 82 Aldehyde Dehydrogenase Gene Family AT4G34240 42.667 2.90e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02273 K00128 - pvu:PHAVU_001G0727000 100.523