Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02271 ATGAGCAACGATGTTTATTCTAGTGATAGTGGAGATAGTGGTAGTGAGCCTACTACTAATAATGAAACAAATGAGCCATTAATGATGGATGTTGGAGGTGAGGTCTTTAAGAGGGTAACAGATTTGACTGCTGATGATATACAAGCGTTACAGTTTGGTTCTCAAAAGGAAGCATATGTATTTTACAATGAATATGCTAAAGCTCATGGATTTGTTGTAAGGAAAGACAAGGTAAAGAAGGATGTTAGGGGGAACATTGTGATGCGGCAATTTGTATGCAATAGGGAAGGACTAAGAAATAAAAAACATTTAATGAGATTAGATAGAAAAAGGGAGCATAGAGCACTTACACGCACAAATTGTGTAGCAAAGCTTCGAATTCGCTTTAATCGAAAGAAATCCAAATGGAGAGTGGTCTCATTTGTGGAGGCCCATAACCATGAGTTAACCCCTTCTAAGTATGTGCATTTACACTCTGCTTATCGTAAGTTGTCAGATGGAGATAAGGCTCGGGTAGATAACTTACATACACATGGTGTGAGAACATGTCACATCATGGGGTATATGTTGGCTTAG 576 0.3837 MSNDVYSSDSGDSGSEPTTNNETNEPLMMDVGGEVFKRVTDLTADDIQALQFGSQKEAYVFYNEYAKAHGFVVRKDKVKKDVRGNIVMRQFVCNREGLRNKKHLMRLDRKREHRALTRTNCVAKLRIRFNRKKSKWRVVSFVEAHNHELTPSKYVHLHSAYRKLSDGDKARVDNLHTHGVRTCHIMGYMLA. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02271 191 MobiDBLite consensus disorder prediction 1 26 - -
Seca7g02271 191 Pfam FAR1 DNA-binding domain 61 150 IPR004330 -
Seca7g02271 191 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 187 - -
Seca7g02271 191 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02271 Seca-Chr7 53119225 53119800 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g02271 FAR1 7.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02271 - - ccaj:109792835 225.328