Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02263 | ATGACCACCCAACAACTTGCCCTGCTGGTGTTAATGATTGCAATATTAGTAACGGTGGGAGGAGCAGCAGCACTTGATGATAACAACGCCCTAACTGGTTGCATAGACACATGCGGAAACGTTTCAATTCCATATCCATTTGGCGTAGGCAAATCTTCTAAAACAGGTGAGAACTGTTTCTTGGAAGAAAGATTGAACCTTACCTGCGACAATAACTCTTTGTATCAAGGCAACACTCAAGTCCTAAACATAGACCTCCTCAAAGGCCAATATGAAATATCTTTTTTTGTTTCAAAGCTTTGCAATGATACAACAAGAGCCAATCAGCCCTCTCTTGAAACTCCTGCTTTTACCATCTCTAGCAAAGAAAACCAGTTCATAAGTGTTGGATGCAACACCTACGGCTATCTCAATAGCTATCACGACGGGGAAGAGTATTCGACGGGGTGTATAACGAGATGTAGCAGGTTACCTGATACGGTGAAAGATGGAGAGTGTTCGGGGATAGGGTGTTGTGAGGTGGATATTCCTTCTCAAATGAAGAATATCACTATACAGACATATAGCTTTAACTCTATGAATTTCAGTGGCTGTAGCTATTCCTTTGTTGCCAAACGAGGCTCATATAACTTTTCTGTTAGTCATTTGGACAAGCTGCCCTTTCATGAGATTCCTATGGTTGTTGATTGGACTGTTGGAAAGGAAAATGAAACATGTGGATTTTTCAAGGAAGGACACAAAAGTGCCTGCATGAATAATAGCTATTGTGACGATGATGACACGAGTTATGGATACCGGTGCAGATGTAAAACTGGTTTTGATGGAAATCCATATCATCCGAATGGTTGCCAAGACATTGACGAATGCAAGACAAAAAATCATACATGCATTAGTGATCTTCATTGTCGCAACATTGATGGGTCTTACGAATGTTTTTGTCCTCCTGGGCAAGTTGGAAATGGAAGAAATACAGGAGGAGGATGCCAACCAATCCGGCACGAAAGTATACTTACCAAGGTAGCCATTGGTGCATGTGCTGGACTTATAGCTCTATTGGGTGCTTCCTGGTTATACTTAATCTATCAAAAAAGGAAACTCACAAAACAAAGAAAAAAATTCTTTCAACAAAATGGTGGTTTCATTTTGCAACGAAGACTCTTTTCAAGAGAAGACTCCCACCAAATTGCTCAAATTTTCACAGCAGAAGAGCTGAAAAAGTCTACCAACAACTACAACGAGAGCTTAATCATTGGTAAAGGAGGTTTTGGAACAGTTTTTAAAGGATTTCTTGCTAATAATAGGATTGTTGCTGTGAAGAAGTCCAAAGTAGTGGATCAAAACCAAGCTGAGCAATTCATCAACGAAGTGATTATTCTATCCCAAATCAATCACAGGAATGTGGTGAAACTCTTGGGTTGTTGTTTAGACACTGAAGTCCCATTATTGGTTTATGAATTTGTTAACAATGGTACCCTTTATGATCATTTACACAATGAAAGCAAGGTAGGTAATCTCACTTGGAAGACTCGTCTAAGAATAGCTATAGAGACAGCTGGAGCATTATCATATTTGCATTCAGATGCTTCAATAACCATTATCCATAGGGATGTGAAGAGTGCAACATTCTTTTGGATGACAATTACACTGCCAAGGTGTCTGATTTTGGAGCTTCAAAGTTAG | 1680 | 0.3964 | MTTQQLALLVLMIAILVTVGGAAALDDNNALTGCIDTCGNVSIPYPFGVGKSSKTGENCFLEERLNLTCDNNSLYQGNTQVLNIDLLKGQYEISFFVSKLCNDTTRANQPSLETPAFTISSKENQFISVGCNTYGYLNSYHDGEEYSTGCITRCSRLPDTVKDGECSGIGCCEVDIPSQMKNITIQTYSFNSMNFSGCSYSFVAKRGSYNFSVSHLDKLPFHEIPMVVDWTVGKENETCGFFKEGHKSACMNNSYCDDDDTSYGYRCRCKTGFDGNPYHPNGCQDIDECKTKNHTCISDLHCRNIDGSYECFCPPGQVGNGRNTGGGCQPIRHESILTKVAIGACAGLIALLGASWLYLIYQKRKLTKQRKKFFQQNGGFILQRRLFSREDSHQIAQIFTAEELKKSTNNYNESLIIGKGGFGTVFKGFLANNRIVAVKKSKVVDQNQAEQFINEVIILSQINHRNVVKLLGCCLDTEVPLLVYEFVNNGTLYDHLHNESKVGNLTWKTRLRIAIETAGALSYLHSDASITIIHRDVKSATFFWMTITLPRCLILELQS. | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02263 | 559 | SMART | egfca_6 | 285 | 329 | IPR001881 | GO:0005509 | |
Seca7g02263 | 559 | ProSiteProfiles | Protein kinase domain profile. | 411 | 559 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02263 | 559 | Gene3D | Transferase(Phosphotransferase) domain 1 | 487 | 546 | - | - | |
Seca7g02263 | 559 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 28 | 541 | IPR045274 | GO:0007166 | |
Seca7g02263 | 559 | FunFam | Wall-associated receptor kinase 2 | 381 | 486 | - | - | |
Seca7g02263 | 559 | Gene3D | Phosphorylase Kinase; domain 1 | 385 | 486 | - | - | |
Seca7g02263 | 559 | ProSiteProfiles | EGF-like domain profile. | 285 | 323 | IPR000742 | - | |
Seca7g02263 | 559 | FunFam | Fibrillin 2 | 280 | 324 | - | - | |
Seca7g02263 | 559 | SMART | egf_5 | 238 | 284 | IPR000742 | - | |
Seca7g02263 | 559 | SMART | egf_5 | 288 | 329 | IPR000742 | - | |
Seca7g02263 | 559 | SUPERFAMILY | Protein kinase-like (PK-like) | 393 | 540 | IPR011009 | - | |
Seca7g02263 | 559 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 302 | 313 | IPR000152 | - | |
Seca7g02263 | 559 | SUPERFAMILY | EGF/Laminin | 279 | 321 | - | - | |
Seca7g02263 | 559 | Gene3D | Laminin | 238 | 326 | - | - | |
Seca7g02263 | 559 | Pfam | Protein tyrosine and serine/threonine kinase | 416 | 538 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g02263 | 559 | CDD | EGF_CA | 285 | 319 | - | - | |
Seca7g02263 | 559 | ProSitePatterns | Protein kinases ATP-binding region signature. | 417 | 440 | IPR017441 | GO:0005524 | |
Seca7g02263 | 559 | Pfam | Wall-associated receptor kinase galacturonan-binding | 34 | 88 | IPR025287 | GO:0030247 | |
Seca7g02263 | 559 | Pfam | Calcium-binding EGF domain | 285 | 318 | IPR001881 | GO:0005509 | |
Seca7g02263 | 559 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 285 | 311 | IPR018097 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02263 | Seca-Chr7 | 52884255 | 52893327 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02263 | 1 | 543 | Receptor kinase-like Gene Family | AT1G21230 | 42.068 | 5.65e-124 | 379 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Seca7g02263 | Pkinase | 4.4e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02263 | - | - | gmx:100779983 | 630.943 |