Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02261 ATGATGGCAATGCTAGCACTGCTAACACTGCTGCTTATGAATCTTGAAAATATTCATAAAGGCCTGTCAGATCCATGTCCCTTCCGTGTAACTTGTACACAGAACAAGAAGATGCTTGAGCTGCAAGGAGTTTCAGGCCCAGTGAAACTCCTCATCAGTCAAATTGATTACAGATTGCAATCACTAGAAGCATATGACCCTGAAAACTGTCTACCTTCAGTATTTCTTAGACTCAACTATTCATCAAACATTCCATTCCAATCTGAATTTCGAGAACAACCGAACAAACTTAGTTTCTTTGATTGTTCTTCAGTAGGGCAACGACATCTGAGAAGCTGGGACCAAATACAAGATGATGCACAAGATATGATATCTTGCCCTATATATGCCACTTTCTCTGATGCAAGTATCGTTGATTTGGACTTATTATCCTGCACCAAATTGTTTGACCGTGTTTTACCAGTACTCTTATATCAGATACGGAGAAACTCATTCTCATTGAAGTGGTCGAATACAAGTTCTGACAGAGGATGCATAGAATGTAAGCAAGAATCAAAGAACAAACCTACATCCATTATTTTAGCTGTTGTAGGTGCAATAGTAGGTTCAATTGCCCTAGGGCTTTTTCTTGGTGTCATCTTTCGAATATATAGCTATTTTAGGATGAAAGGGGAAGATGATGCAAGAGTGGAAAACTTCTTGAAGGATTACAGGGCTTTAAAGCCAACCAGATTCTCTTATGCTGATATAAAGAGAATCACACATCAATTTAAGGAAAAGTTAGGTGAAGGAGCTCATGGAGCTGTGTACAAAGGTAAATTATCCAGTGAAATTGTGGTTGCTGTGAAGATCCTCAATAACACAGAGGGAGATGGAACAGAGTTCATAAATGAAGTTGGAACCATGGGCAAAATCCACCATGTCAACGTGGTTCGTTTGCTTGGCTTCTGTGCTGATGGATTTCACCGAGCTTTAGTTTATGACTTTTTCCCAAATGGTTCATTGCAGAAATTTATCTCTATACCAAACAACAAGGATGCATTTCTTGGATGGGAAAAGTTGCAACAAATTGCTCTGGGTATAGCCAGAGGAATTGAGTATCTTCACCAAGGTTGCGATCATAGAATCCTTCACTTTGACATCAATCCTCATAACGTCTTGCTAGATGACAGTTTCATTCCTAAGATTTCAGACTTTGGTTTAGCTAAGCTGTGCTAA 1218 0.3916 MMAMLALLTLLLMNLENIHKGLSDPCPFRVTCTQNKKMLELQGVSGPVKLLISQIDYRLQSLEAYDPENCLPSVFLRLNYSSNIPFQSEFREQPNKLSFFDCSSVGQRHLRSWDQIQDDAQDMISCPIYATFSDASIVDLDLLSCTKLFDRVLPVLLYQIRRNSFSLKWSNTSSDRGCIECKQESKNKPTSIILAVVGAIVGSIALGLFLGVIFRIYSYFRMKGEDDARVENFLKDYRALKPTRFSYADIKRITHQFKEKLGEGAHGAVYKGKLSSEIVVAVKILNNTEGDGTEFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQKFISIPNNKDAFLGWEKLQQIALGIARGIEYLHQGCDHRILHFDINPHNVLLDDSFIPKISDFGLAKLC. 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02261 405 PANTHER RUST RESISTANCE KINASE LR10-RELATED 227 405 IPR045874 GO:0004672
Seca7g02261 405 SUPERFAMILY Protein kinase-like (PK-like) 238 404 IPR011009 -
Seca7g02261 405 Gene3D Transferase(Phosphotransferase) domain 1 330 405 - -
Seca7g02261 405 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Seca7g02261 405 FunFam serine/threonine-protein kinase PBS1-like 223 329 - -
Seca7g02261 405 Gene3D Phosphorylase Kinase; domain 1 229 329 - -
Seca7g02261 405 Pfam Protein tyrosine and serine/threonine kinase 256 403 IPR001245 GO:0004672|GO:0006468
Seca7g02261 405 FunFam Os07g0541700 protein 330 405 - -
Seca7g02261 405 ProSiteProfiles Protein kinase domain profile. 255 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02261 Seca-Chr7 52875137 52877428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02261 169 405 Receptor kinase-like Gene Family AT1G66910 45.635 1.28e-61 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca7g02261 PK_Tyr_Ser-Thr 3.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02261 - - tpra:123893308 518.464