Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02255 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAGCAGGGATTTCATGGGGGCTCGTAAATTTGCTCTTAAAGCTCAGCAGCTGTATCCTGATCTGGAAAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCATTGCTCTGCTGAGATGAAATTGTTCGGCAATGAGATGGACTGGTATGAAATTCTTCAACTGGAACAGACGGCTAATGATGCAATGATTAAAAAGCAATACAGGAAGTTCGCACTCCAACTTCATCCCGACAAAAACAAGTTTGCTGGTGCAGAAGCCGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTAGACAGAGAAAAACGATCTCAGTTTGACATGAAGCGCAGGGTTCCAATGAACAAAACTGCTATGTCACGGCGTAATCAGCAGAAGGCTCCTATGAATTCCAGTTCTGCAATGAAAACCAATGTCAGGCCCAATTTTGCAAACTCGAATACTCAGCAGCAGCAACAATATAAGCAGCCAGTGCAGCAGCAGCAAAATGGTGGCCGCCCTACTTTTTGGACTGTCTGCCCATTTTGTTCTGTTAAGTATCAGTATTACAGAGAAGTTTTAAATAAACCTCTTCGCTGTCAACATTGCAATAGGCCCTTCATTGCATATAATGTGGATAGGAAAAGTACACCATCAGCAACTAATTCAAGTCAGCAAGCTTTTGGCCAGCAAAAAGATGGTCTGAATCATGGTCCTTCCAAGATGGGTGGATCTCAAGGCAACTTGCATGCTGAGAAGTCCAATACTGGGCTTCACGAGAAGAAAGGCCCTGTTGATGTCTCTGGAAAGCCACATGGAAAGAGGAAGAGGAATAAGTTGGCAGAATCTAGTCAAAGTTCTGATTTTACGAGCAGCACTGATTCTGAAGGTGGTAGGGTTGTTGGTGAGGATGGTGTTCCTGGTGTAGAAAATCATTCAACTTACAGAGAAGAGCAACCACGCAGATCTGCACGACAAAAGCATAAGGTTTCCTACAAGGATAATGTGAGTGACAATGATGATGACCTCTTAAGACCTTCAAAAAGGGGTGGTGATGGTGAAAGTCAGGGTGAGAGAATTAGAAAGAATGATCAGAATGGTTTAGCTGCTGAAGAGAGCTTACGAGATAGAAATGAGGAAACTAAAGTGGCGAGGGGAAAAGCAGTGGGAGGGTCAAAGCAGATGGATGAAACATCAGAGCATTCTTTTTCGGATTTAGCCTCCAAAGCAACAAATCATCCAAATGCTTATGTCTATTTCGAAGCAGAGTTCAGTGACTTTGACAAGGACAAGAAAAAAGAATGTTTTGTGGCAGGGCAGATTTGGGCTGTTTATGATACAACACATGGCATGCCTAGATTTTATGCTTTAATCAGGAAAGTTCTATCTCCTAGATTCAAGCTGCAGATAACATGGTTGGAATCACATCCAGGTAACAATGATGAAATGAAGTGGGTAAATGAGGATATGCCTGTTGCATGTGGGAAATATAAACTTGGTGACACTAACATCATGGAAGATCATCTGATATTCTCTCATGTGGTTACGTGTGAAAAGATTGGCCGCAATACTTTCAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGCAGAATCTCATAAGCAGTATGAATATGAGTTTGTTGAAGTCTTGTCAGATTATGTTGAAGGTGAGGGTGTATATGTTGCACACTTAGCTAAGTTGAAAGGTTTTGTAAGCCTCTTTTTTCGAATTAGGAAAGAAGATAACCAGTCATTTCAAATTCCACCCCAGGAATTATTCAGATTCTCTCACAGGGTTCCCTCTTTCAAAATGACTGGTCAGGAAGTAGTAGATGTTCCTGTAGGATCTTATGAACTTGATCCTGCAGCTTTGCCGATGAATCTTGAAGAGTCTGCTGTTCCTGAAAATTTGGATGTGAAGTTTGGTCACAGTTCTGGCACTGAGAATACAAGATCTTCAGAAAGATCAAAACCCCCAATGACATCTGACAGAGAGGTATCTACTCCCAAGGTTAATTTGAAAAGAAGCAATTTGGCTGAGAATAAGGATTTTGTTGATGATATTGATGATTGTCATGCTCCTCCAGCTTCGACCCCAGAAGCTATTGTAGTTCCAGATACCCAATTCTTCAATTTTGATGCTGAGAGGTCCCTTGAAAAGTTTCAAATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATACTATGGTCAGATTGATGGGATTGAGACTAGCCCACATCTTGAATTGCATGTTTCTTGGCTTGCTTGCTGCTGGCTACCAGAGAATACCACTAGATGGGAAGACAAAGATATGGCTATTTCCTGTGGCAGATTTAAAGTTAATAAAAGAATTGACTTTCTCAGTGTTTATAGTGGCACCGATTCTGTTTCACACCAAGTGCATGCTGATGCTGTTGGCAACAAAAAGAATTACGCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGAAAGTGGTCAAATAAAATCAAATGTTCTGACTTGAAAAATTGGGAGTATGACATAGTTGAAGTTCTTGAAGAAACTGATTTATTTACAAATGTTCTAGTATTGGAGTTTGTTAGTGGTTTTAGTTCCATTTTCCGGGGCAAGTCAAATGAAGGATCATCTGTCAACCTGAGAATACCCAGAAAAGAGTTGCTTAGGTTCTCCCACAGAATTCCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTGAGTGGCTTCCTGGAACTTGATCCAGGTGCGCTACCAATTCATTATTATGGCTTGGGATGA 2877 0.4101 MDCNKEEALRAKDIAEKKMESRDFMGARKFALKAQQLYPDLENIAQMLVVCDVHCSAEMKLFGNEMDWYEILQLEQTANDAMIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSQFDMKRRVPMNKTAMSRRNQQKAPMNSSSAMKTNVRPNFANSNTQQQQQYKQPVQQQQNGGRPTFWTVCPFCSVKYQYYREVLNKPLRCQHCNRPFIAYNVDRKSTPSATNSSQQAFGQQKDGLNHGPSKMGGSQGNLHAEKSNTGLHEKKGPVDVSGKPHGKRKRNKLAESSQSSDFTSSTDSEGGRVVGEDGVPGVENHSTYREEQPRRSARQKHKVSYKDNVSDNDDDLLRPSKRGGDGESQGERIRKNDQNGLAAEESLRDRNEETKVARGKAVGGSKQMDETSEHSFSDLASKATNHPNAYVYFEAEFSDFDKDKKKECFVAGQIWAVYDTTHGMPRFYALIRKVLSPRFKLQITWLESHPGNNDEMKWVNEDMPVACGKYKLGDTNIMEDHLIFSHVVTCEKIGRNTFKVYPRKGETWALFKNWDIKWYMDAESHKQYEYEFVEVLSDYVEGEGVYVAHLAKLKGFVSLFFRIRKEDNQSFQIPPQELFRFSHRVPSFKMTGQEVVDVPVGSYELDPAALPMNLEESAVPENLDVKFGHSSGTENTRSSERSKPPMTSDREVSTPKVNLKRSNLAENKDFVDDIDDCHAPPASTPEAIVVPDTQFFNFDAERSLEKFQIGQIWAFYSDEDGLPKYYGQIDGIETSPHLELHVSWLACCWLPENTTRWEDKDMAISCGRFKVNKRIDFLSVYSGTDSVSHQVHADAVGNKKNYAIFPRKGEVWALYRKWSNKIKCSDLKNWEYDIVEVLEETDLFTNVLVLEFVSGFSSIFRGKSNEGSSVNLRIPRKELLRFSHRIPAFKLTEEHGNLSGFLELDPGALPIHYYGLG. 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02255 958 MobiDBLite consensus disorder prediction 229 247 - -
Seca7g02255 958 MobiDBLite consensus disorder prediction 324 400 - -
Seca7g02255 958 SMART dnaj_3 66 123 IPR001623 -
Seca7g02255 958 MobiDBLite consensus disorder prediction 229 415 - -
Seca7g02255 958 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Seca7g02255 958 Pfam Domain of unknown function (DUF3444) 431 635 IPR024593 -
Seca7g02255 958 Pfam Domain of unknown function (DUF3444) 727 935 IPR024593 -
Seca7g02255 958 MobiDBLite consensus disorder prediction 669 697 - -
Seca7g02255 958 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 951 - -
Seca7g02255 958 MobiDBLite consensus disorder prediction 138 162 - -
Seca7g02255 958 PRINTS DnaJ domain signature 103 123 IPR001623 -
Seca7g02255 958 PRINTS DnaJ domain signature 87 102 IPR001623 -
Seca7g02255 958 PRINTS DnaJ domain signature 69 87 IPR001623 -
Seca7g02255 958 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Seca7g02255 958 MobiDBLite consensus disorder prediction 297 311 - -
Seca7g02255 958 CDD DnaJ 67 120 IPR001623 -
Seca7g02255 958 Pfam DnaJ domain 67 128 IPR001623 -
Seca7g02255 958 MobiDBLite consensus disorder prediction 665 697 - -
Seca7g02255 958 Gene3D DnaJ domain 64 187 IPR036869 -
Seca7g02255 958 MobiDBLite consensus disorder prediction 134 162 - -
Seca7g02255 958 MobiDBLite consensus disorder prediction 268 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02255 Seca-Chr7 52817972 52820869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02255 4 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.808 1.98e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02255 - - gmx:100795200 1436.78