Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02241 ATGGTGTCTTGCAAACCTTTTAGACCTTGCTTCTTGGATGTGATGATATTGCAACAGGCACCACAATTTTACAGTGAAGAGGAAATGGATAAAGTCAAGAATATATGCAAATTGCATCTACAAGAAGAAAATGATGAGCAAAAAAATAATGATAAAAGTTTGATGAAAAAAAGGCACATTCAAATTGAAGACTTGCTTGAAGAGGAGGAAAGAGTCACAGCGGTTAAAAAAAGATCAAGAAAGATTATTATTAAGTCAAAGAAACCCCCACCATTATCACCACCGCCGCCAACACAACCATTGTTACCTGCACCTTCATCAGATTTGCCTACAATGTTCAGAAGTTGGATTGAAGAGTTGAACGGTTCTGATGTCAATTTTCTCATGCACAAGAAACTTCACTACAGCGCTGTGAGCACAAATAACAATCGTTTGTCCATGCAACAAAATCAACTTAAGTTTGATTTCCTCACCGAAGTTGAGAAAGCAATGTTGGATGAAAAAGAAGGCATTGAAGTGATTGTCTTAGACCCATGTCTTAGACAATTTTCTTTAATCTTGAAGAGGTGGAAGATGAAAAATGTGAACATCTATAATCTAATAAGGAGTTGGAACAAAGTTGTGCATGAAAATAAATTCAAGAAAAACCATGAACTCCAAATATGGTCTTGTAGGGTCAATAGCAAATTATACTTTCTGTTATATAAACATTAA 714 0.3515 MVSCKPFRPCFLDVMILQQAPQFYSEEEMDKVKNICKLHLQEENDEQKNNDKSLMKKRHIQIEDLLEEEERVTAVKKRSRKIIIKSKKPPPLSPPPPTQPLLPAPSSDLPTMFRSWIEELNGSDVNFLMHKKLHYSAVSTNNNRLSMQQNQLKFDFLTEVEKAMLDEKEGIEVIVLDPCLRQFSLILKRWKMKNVNIYNLIRSWNKVVHENKFKKNHELQIWSCRVNSKLYFLLYKH. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02241 237 MobiDBLite consensus disorder prediction 88 104 - -
Seca7g02241 237 SUPERFAMILY DNA-binding pseudobarrel domain 126 233 IPR015300 -
Seca7g02241 237 Gene3D - 118 236 IPR015300 -
Seca7g02241 237 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 16 236 IPR005508 GO:0003677
Seca7g02241 237 MobiDBLite consensus disorder prediction 83 105 - -
Seca7g02241 237 Pfam B3 domain-containing protein At2g31720-like 114 209 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02241 Seca-Chr7 52583808 52592923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02241 113 234 B3 DNA Binding Superfamily AT1G05930 30.000 1.29e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02241 - - gmx:102663171 189.504