Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02223 ATGTCATATATCTCTACTAAATACATCCCAGTGAGGGAAATTGCACCGCAGAAGGAATATTGGATCATAAGGGCTAGGATTATAAGATTGTGGGCAGTCACAGATTACAGAGACAAGTTCCGTGTGTTGTCTTACGAGATGGTCTTCATTGACAGACATGGTGACAAGATCCAAGCTTCCATTAGCAAACAGATGTGCATCATTAAGAATTGTCACATGGAGGAAGGACACTTCTATGATATCAAGGATGTCCTTGTGGTTCCTAATGATGGTTGTGACCGACCAACGCGCCATCCTTTTCGATTGGTGATTGAAAGGCGCTCTTCATTTTGCAGGGCTGAACCTCTTCCATTTAGATCCTTTGGGTTATCACCGATTAGTTCTGCCGAAATTCCGCGGACAAAACATGATAGTCAATTTCTCGTGGACAAAGTGGGTTTACTTACTGCTGTTTCTTGCGAACGAGAATACATTATGGATGACAAAGAAACTAGATTGGCATTTCTAGAGATAACCGACCCGATTGGGAAGGTTGAATGTGTGTTGTACGATGCTTATTTGGATGAACTCATTGAGTTCATTAAAACTAATGGGCCTTGCACACCAATCATTTTGCTCCAGTTTGTACGAGTGGTTCCAGACGCACAAGTTCTTTATGGGGATGTTGGGATTGAAAGTGTTCCAAATATCACTCGCCTGTTATTCAACCCTTCCATACCAGAGGCTTTTGACATGAATGGCTGGTTAACCATGAGTGGATTTAGTCTTGACGGGAGGATTCAGTATCGACAAATGGAAATGCCATGTCTTACCTTGCGTGATGAGTTCCTGCTTCACCATCAAAGGAAGTATATAGCTGATTTAAACACCAATGGAAAGGTGGGTGGCCTACTTGTGGTTTGTGTTATGATCACATCATTCATGGATAACGAGGCTTGGTGGTACACAGCATGTCGACCTCATGCTTGCAGCTCTAAGGGTAGTTCCCTGTACACATGCGATGGTGATTACTCCATTATACCTAGATATTCTGTAAAGGTTGAAGTGTGCGATGGAAAAGATTCAACCTACCTAATCCTAGGAGATGAACATATTGAGAAATTACTCGAGATTTCATGCAAAGATATGTTGTCCACAATATCTGATCCCTCCGTTGTTGCATATCCAGCCATCTTTGACCATCTCATTGGCATGAGGATGTTGTTCTTGGTTGAGACAACAACGACCAATAATGTACAGGAGGGTTGCATTCGGGTTAAAACAATTTGCACTGACAGGGAATTAATGCGGATGTGCTTGAAGGGACAATATTTTCGTGTTGACCGAAGGCCACGAACAACAATTGCAGTGATGTTAGGTGAGACGAGTAATGCAAGACAATTCACCCATGCAGAGTGTAGTTCATATGCAAGTGCTCGCCCAGCAGAAAATTTTGCAACTGCAAGTTCAGGAACTGCTCAGAGGTCTGGAGCTGGTAGTGCTTCCGTCAATTACAACCAACAAATTAACGCTGAAATGAACAACACCCCCCAAGTTGTGAAGCATTGTGTCCACATGACACAGAGGTCTACCGACGGCTGA 1581 0.4314 MSYISTKYIPVREIAPQKEYWIIRARIIRLWAVTDYRDKFRVLSYEMVFIDRHGDKIQASISKQMCIIKNCHMEEGHFYDIKDVLVVPNDGCDRPTRHPFRLVIERRSSFCRAEPLPFRSFGLSPISSAEIPRTKHDSQFLVDKVGLLTAVSCEREYIMDDKETRLAFLEITDPIGKVECVLYDAYLDELIEFIKTNGPCTPIILLQFVRVVPDAQVLYGDVGIESVPNITRLLFNPSIPEAFDMNGWLTMSGFSLDGRIQYRQMEMPCLTLRDEFLLHHQRKYIADLNTNGKVGGLLVVCVMITSFMDNEAWWYTACRPHACSSKGSSLYTCDGDYSIIPRYSVKVEVCDGKDSTYLILGDEHIEKLLEISCKDMLSTISDPSVVAYPAIFDHLIGMRMLFLVETTTTNNVQEGCIRVKTICTDRELMRMCLKGQYFRVDRRPRTTIAVMLGETSNARQFTHAECSSYASARPAENFATASSGTAQRSGAGSASVNYNQQINAEMNNTPQVVKHCVHMTQRSTDG. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02223 526 Gene3D - 7 114 IPR012340 -
Seca7g02223 526 SUPERFAMILY Nucleic acid-binding proteins 135 257 IPR012340 -
Seca7g02223 526 Gene3D - 116 255 IPR012340 -
Seca7g02223 526 CDD RPA1_DBD_A_like 23 102 - -
Seca7g02223 526 Gene3D - 278 434 IPR012340 -
Seca7g02223 526 SUPERFAMILY Nucleic acid-binding proteins 281 428 IPR012340 -
Seca7g02223 526 SUPERFAMILY Nucleic acid-binding proteins 7 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02223 Seca-Chr7 52120665 52123322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02223 7 378 Core DNA Replication Machinery Family AT2G06510 21.359 2.49e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02223 - - mtr:11425976 227.639