Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02221 ATGCACAAGAAACTTCACTACAGCGACGTGAGCACAAATAACAATCGTTTGTCCATGCAACAAAATCAACTTAAGTTTGATTTCCTCACCGAAGTTGAGAAAGCAATGTTGGATGAAAAAGAAGGCATTGAAGTGATTGTATTAGACCCATATCTTAGACAATTTTCTTTAATCTTGAAGAGGTGGAAGATGAAAAATGTGAACATCTATAATCTAATAAGGAGTTGGAACAGAGTTGTGCATGAAAATAAATTCAAGAAAAACCATGAACTCCAAATATGGTCTTGTAGGGTCAATAGCAAATTATACTTTTTGTTATATAAACATTAA 330 0.3273 MHKKLHYSDVSTNNNRLSMQQNQLKFDFLTEVEKAMLDEKEGIEVIVLDPYLRQFSLILKRWKMKNVNIYNLIRSWNRVVHENKFKKNHELQIWSCRVNSKLYFLLYKH. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02221 109 Pfam B3 domain-containing protein At2g31720-like 2 81 IPR005508 GO:0003677
Seca7g02221 109 SUPERFAMILY DNA-binding pseudobarrel domain 2 106 IPR015300 -
Seca7g02221 109 Gene3D - 1 109 IPR015300 -
Seca7g02221 109 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 108 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02221 Seca-Chr7 52084314 52084643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02221 1 106 B3 DNA Binding Superfamily AT1G05930 34.211 7.73e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02221 - - lja:Lj0g3v0137809.1 126.716