Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02213 | ATGAGACCTATTCAAGAACCATCACTATCTATCCCACAACACAGTCCTTTCAGCGATAACTTCTACATCAATTTTTGTTTCAGCCATTCAATTTTTGTCCATCAACACTCCAACGGTACAAACTCTGTCTCTCACTTCACTGCATCCCCAGTAACGAACCGTATTTTCTTGGTCCCTATTGACATCTTATGTCATTGTGATGAGTCCACAGTCTTGGACCGAGAAAACACTATCTTCTTGCGCGACACGTTTTCCTCCTTGCGTATTCACCCTGAGATTTTGCATGAAATTCTACCTCACATGGGTCAATGCGCTAGACAGATGGTAGCTGAAGATAAGGATAAAGAGCGGAATGTGTGGGAGATGGATATAACGCTTCAAGTTACCACATCGGTTGGGATTAATAATGAGTGGGGTGTGAGTTTAGCATCCCAAATTGTGCATTTGTTAGAGAAAGTCGGAACAGATCATACTTGTCCTTATTCTACGGGACAATGTGCAATTTGTTTGGAGAAGTACTTATGTAATGGATCAAAGTCATCAGAACTTGTTCGCACTAAATGCTTCCATGTTTTTCATAAAAAGTGTATTCTCCAATGGCTTGAGCATTGCGAATCATCCTATCCTTGCCCGTTGTGTCGTTGTCAAATAATATGA | 657 | 0.4094 | MRPIQEPSLSIPQHSPFSDNFYINFCFSHSIFVHQHSNGTNSVSHFTASPVTNRIFLVPIDILCHCDESTVLDRENTIFLRDTFSSLRIHPEILHEILPHMGQCARQMVAEDKDKERNVWEMDITLQVTTSVGINNEWGVSLASQIVHLLEKVGTDHTCPYSTGQCAICLEKYLCNGSKSSELVRTKCFHVFHKKCILQWLEHCESSYPCPLCRCQII. | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02213 | 218 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 218 | IPR013083 | - | |
Seca7g02213 | 218 | Pfam | Ring finger domain | 165 | 214 | IPR001841 | - | |
Seca7g02213 | 218 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 92 | 215 | - | - | |
Seca7g02213 | 218 | SUPERFAMILY | RING/U-box | 165 | 217 | - | - | |
Seca7g02213 | 218 | ProSiteProfiles | Zinc finger RING-type profile. | 166 | 214 | IPR001841 | - | |
Seca7g02213 | 218 | Coils | Coil | 215 | 218 | - | - | |
Seca7g02213 | 218 | SMART | ring_2 | 166 | 213 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02213 | Seca-Chr7 | 51833332 | 51833988 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02213 | 149 | 217 | C3H Transcription Factor Family | AT4G12190 | 38.028 | 3.44e-08 | 47.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02213 | - | - | adu:110273516 | 144.05 |