Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02208 ATGGAGGAGGGGGGTGATACTATCGTGTATAGTAGCTACATTGAGGCAGCTGAGAAATCTATTTCTACAAAGACCATAATCGCGGAGAAAAACTTCACCGTTTTGGAAGAATCTAACATCAAGCGGCTTCAAGAGGCCGATATCAATCAGGTTTCGTATGTTCTTTCAATATCAAAATTTTCTGCTTGCCTTTTGCTGCGTCACTGTGAGTGGAGCGTGGCTAAAGTGCTTGAAGCATGGATTGATAATGAAGAAAGAGTTCGCAACACTGTAGGGTTGCTTAAACAACCCCAGGTAAATTTTTCCAGCCCAGAAACTTTCATGTGTGGGATCTGTTTCGAAACCCTTTGTGGTGATAAGATTAGATCAGCAGGGTGTGGCCATCCATTTTGCATGATTTGTTGGATGCGTTATGTGGATACAAAGATTAACGAGGGTCCTTATAAGTGCTTGACACTTAGATGCCCCGAACCCTCTTGTGGTGCAGCTGTGGATGGAGGCATGGTTCATGAACTTGCAAGTGAATCTAGTAAGAAAAGTAATAATCAGTTTCAAGAGACTAGCAAGAAGGAAATAGAAATTAAGATGTCAAGGGGTTATTTTGATAGGTACATTTACTATTATGATCATTGGGCTAGAAATGATGTTTTAAGAAAAAATGTCATTGAAAATTTGATTTACCTTAAACCTATAACAAGACCGTGTAAGTTGTTTCAAAGGCCTGAAACTGATTTTAATTTTATAATAAAGGCTTGGAAACAAGTGATTGAATGTAGAGGGATACTAAAATGGTGTTATACATATGGATATTATCTCTCTGATAATATAAAGGCCAAGAAAGACTTTTTTGAGTGCATCCAACATAAGGCTGAGGTTACTTTCGAAAAGCTTGATCAATGTGTAGGAATGGAATTGGGAGAGTATCTAAATGTTGATCGAAAAGATGAATTTAATGATTTTTCTTTGAAGCTAGTCAATTTGACTAATGTGACCAAGAACTATTTTGACAAGTTGGTGAAAGCATTAGAGGATGGCCTTGTTGATGTGCATGTGAATAACGACACAAGTATGAAAAGAAAATCAAGTGAGATAGGCAAGACTTCTTATCGAAAGGGAACCAAGAGAATAATTACCATTGATGGACTGGCCAAAAATGATCTCTGGCAATGTGAGGCATGTGGTCAATACAATTCTGCCTCTTCTCTTGTGTGTCAGGATATTAATTGCATACAACGCTTTGATTAG 1245 0.3783 MEEGGDTIVYSSYIEAAEKSISTKTIIAEKNFTVLEESNIKRLQEADINQVSYVLSISKFSACLLLRHCEWSVAKVLEAWIDNEERVRNTVGLLKQPQVNFSSPETFMCGICFETLCGDKIRSAGCGHPFCMICWMRYVDTKINEGPYKCLTLRCPEPSCGAAVDGGMVHELASESSKKSNNQFQETSKKEIEIKMSRGYFDRYIYYYDHWARNDVLRKNVIENLIYLKPITRPCKLFQRPETDFNFIIKAWKQVIECRGILKWCYTYGYYLSDNIKAKKDFFECIQHKAEVTFEKLDQCVGMELGEYLNVDRKDEFNDFSLKLVNLTNVTKNYFDKLVKALEDGLVDVHVNNDTSMKRKSSEIGKTSYRKGTKRIITIDGLAKNDLWQCEACGQYNSASSLVCQDINCIQRFD. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02208 414 FunFam RBR-type E3 ubiquitin transferase 103 192 - -
Seca7g02208 414 ProSiteProfiles Zinc finger RING-type profile. 109 156 IPR001841 -
Seca7g02208 414 SUPERFAMILY RING/U-box 104 182 - -
Seca7g02208 414 Gene3D - 109 349 - -
Seca7g02208 414 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 44 169 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02208 Seca-Chr7 51767452 51769089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02208 177 405 ARIADNE family AT1G65430 36.207 2.92e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02208 K11968 - qsu:111995178 177.948