Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02194 ATGGAATTTGAAGATTTTTATGCATCTACTTTTGCGCCTAATTCAAATGGGTTTGTTCAAGAGACAATCACAGAATGGAGTAAAGAAATGGTAGAAGATGTGAGTACGATAGAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGACCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACACTTTTTCTGATGGGAGTTTCGAAGTGTGGCAAAGGGCACTGGACAGATATCGCTCACAATTTTGTGATCACAAAGACTCCTACTCAAGTGGCAAGCCATGCTCAAAAGCACTACCTAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGGTCTAGTATCCATGATATCACCACTGATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTCTTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGTGTTAGAGCCACTCATGCAGAATGAAGAGCCAGTTTATGATGATACGTTCTTGTCTTCCTCATATGACATCTATTCCGAGTTTCAAGTTCTGGAAGATCTATACAACTCTGTTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCGACTGTGCTCTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCGACTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAGTGGCTTCTAATGACTTCAACAACATTAGATGA 831 0.426 MEFEDFYASTFAPNSNGFVQETITEWSKEMVEDVSTIEAAGGVPVPAYPFSMEMVDNLQGHDGCKKRPATAKERKKGVRWTKEEHTLFLMGVSKCGKGHWTDIAHNFVITKTPTQVASHAQKHYLRQNLSGGKRKRSSIHDITTDNLKTSGQDKPALLFNESHMPNVQPQEGINHHNVLEPLMQNEEPVYDDTFLSSSYDIYSEFQVLEDLYNSVFHQPYAQQGFTMASNDFDCALHQPYAQQGFTMASNDFDCAFHQPYAQQGFTVASNDFNNIR. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02194 276 Gene3D - 78 129 - -
Seca7g02194 276 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Seca7g02194 276 PANTHER TRANSCRIPTION FACTOR KUA1 22 204 - -
Seca7g02194 276 ProSiteProfiles SANT domain profile. 79 128 IPR017884 -
Seca7g02194 276 SUPERFAMILY Homeodomain-like 74 128 IPR009057 -
Seca7g02194 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 128 IPR017930 -
Seca7g02194 276 ProSiteProfiles Myb-like domain profile. 72 124 IPR001005 -
Seca7g02194 276 SMART sant 76 126 IPR001005 -
Seca7g02194 276 CDD SANT 79 123 IPR001005 -
Seca7g02194 276 NCBIfam myb-like DNA-binding domain, SHAQKYF class 75 127 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02194 Seca-Chr7 51373161 51375349 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02194 Myb_DNA-binding 9.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02194 - - gmx:100783469 187.578