Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02190 ATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGACCTGTAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACACTTTTTCTGATGGGAGTTTCGAAGTGTGGCAAAGGGCACTGGACAAATATCGCTCACAATTTTGTGATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGCACTACCTAAGGCAAAACCTCTCTGGAGGGAAAAGGAAGAGGTCTAGTATCCATGATATCACCACTAATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTCTTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGTTTTAGAGCCAGTCATGCAGAATGAAGAGCCAGTTTATGATGATATGTTCTTGTCTTCCTCATATGACATCTATTCCGAGTTTCAAGTTCTAGAAGATCTATACAACTCTGTTTTTTATCAGCCTTATGTCCAACAAGGTTTCACAATGGCTTCTAATGACTTCGACTGTGCTCTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCAACAACATTAGATGA 618 0.4207 MEMVDNLQGHDGCKKRPVTAKERKKGVRWTKEEHTLFLMGVSKCGKGHWTNIAHNFVITKTPTQVASHAQKHYLRQNLSGGKRKRSSIHDITTNNLKTSGQDKPALLFNESHMPNVQPQEGINHHNVLEPVMQNEEPVYDDMFLSSSYDIYSEFQVLEDLYNSVFYQPYVQQGFTMASNDFDCALHQPYAQQGFTMASNDFNNIR. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02190 205 Gene3D - 27 78 - -
Seca7g02190 205 PANTHER TRANSCRIPTION FACTOR KUA1 19 174 - -
Seca7g02190 205 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Seca7g02190 205 MobiDBLite consensus disorder prediction 1 26 - -
Seca7g02190 205 SMART sant 25 75 IPR001005 -
Seca7g02190 205 MobiDBLite consensus disorder prediction 7 26 - -
Seca7g02190 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 77 IPR017930 -
Seca7g02190 205 CDD SANT 28 72 IPR001005 -
Seca7g02190 205 Pfam Myb-like DNA-binding domain 28 72 IPR001005 -
Seca7g02190 205 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 76 IPR006447 GO:0003677
Seca7g02190 205 FunFam transcription factor MYB1R1 27 78 - -
Seca7g02190 205 MobiDBLite consensus disorder prediction 77 101 - -
Seca7g02190 205 ProSiteProfiles SANT domain profile. 28 77 IPR017884 -
Seca7g02190 205 SUPERFAMILY Homeodomain-like 23 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02190 Seca-Chr7 51323102 51324860 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02190 Myb_DNA-binding 8.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02190 - - gmx:100783469 164.851