Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02187 ATGGAATTTGAAGATCTTTATGCATCTTGTTTTGCGTCAAATTCAAATGGGTTTGTTCAAGAGACAATCATAGAATGTAGAGAAATGGTAGAAGATGTGAGTAAGATAGAAGCTGCAGGAGGGGTTCTAGTTTCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACTCGTTTTCTGATGGGAGTTTCGAAGTATGGCAAAGGTCACTGGAGAAACATCGCTCACAATTATGTAATCACAAAGACTCCTACCCAAGTGACAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGGTCTAGTATCCATGATATCACCACTAATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTATTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAATAA 510 0.4176 MEFEDLYASCFASNSNGFVQETIIECREMVEDVSKIEAAGGVLVSAYPFSMEMVDNLQGHDGCKKRPATAKERKKGVRWTKEEHTRFLMGVSKYGKGHWRNIAHNYVITKTPTQVTSHAQKYYLRQNLSGGKRKRSSIHDITTNNLKTSGQDKPAILFNESHMPNVQPQ. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02187 169 ProSiteProfiles Myb-like domain profile. 71 123 IPR001005 -
Seca7g02187 169 FunFam transcription factor MYB1R1 77 128 - -
Seca7g02187 169 SMART sant 75 125 IPR001005 -
Seca7g02187 169 Pfam Myb-like DNA-binding domain 78 122 IPR001005 -
Seca7g02187 169 PANTHER TRANSCRIPTION FACTOR KUA1 24 153 - -
Seca7g02187 169 CDD SANT 78 122 IPR001005 -
Seca7g02187 169 SUPERFAMILY Homeodomain-like 73 127 IPR009057 -
Seca7g02187 169 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 127 IPR017930 -
Seca7g02187 169 NCBIfam myb-like DNA-binding domain, SHAQKYF class 74 126 IPR006447 GO:0003677
Seca7g02187 169 Gene3D - 77 128 - -
Seca7g02187 169 ProSiteProfiles SANT domain profile. 78 127 IPR017884 -
Seca7g02187 169 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02187 Seca-Chr7 51248224 51248961 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02187 Myb_DNA-binding 8.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02187 - - gmx:100783469 171.4