Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02167 ATGATGGAATCTGCAGCATCAAGGACAGTTGGAACTTCATTTTTGGGTCCCTTATGCGAGGCTTGGTTAGCAAATTTATTTCCCGATACTGAGGTTTTCCCTTGTCTAATGCATTTCAGTATGAGGTCTTACTATTGTAGTTGTGATGATAAGGCTGAGGGGAGCTTATGGATACACAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGCGGTAATGATGAATCTCTAAATTTCTTGCGTGACTGGTTACGACTTTGGCATGAAAGACGTGACCAAAACAGAAAGGATTCCTCTAACTGGGATCAAAGAGACATGCAAGACCATGATGATGTTTATAGCTGTTCTGATGGTGACTATTCTTCAAAAGACCTCAACAAGGAGGATTCCCTGCAGAACGTTCTTTTGATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAGGAACAAGGGTTTGACGTTTTAGAGCTCAATGCATCAGACTGTCGAAATGGGACTGCTGTCAAGCAGTATTTTGGAGATGCTCTCGGATCACATGGTTGCAAAAGGTTACTGGAACACAGTGTGAGTTCACAGAAGAAAACTGTGATGTTGCCCCCAGCTCCAGCTTTGCCTAATGATAAAGCAGTTGAGGAGATGGATGATGGGGTGATTGAATTGATAACCATATCCAATGGTGGAGCTCATAGTCCTGGTGGAAAATCTCAGAGGTTACATGACAAAAATAATGTATTTACATGTGATAGTGTTCAAACTTTAATTTTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATAAAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAACAGTAATAATGGTGGCCTTCCAGATAATTTTGTTAGACTACATATTCCTTTCTCATTGCCATTGCGAGATGAGTTGCTTTGCCATTTGTACATGGTTTGTGACGCAGAAGAAGTCAACATCAATCCACTTTTACTGGAGAAGTTTATCAAGTCTTGCGATGGAGATATTCGAAAAACCATTATGCATGCTCAGTTCTGGTTCCAGAATAAAAAATATAGAAAAGACAGGAAAGTGCAGACAGTGTACGGCTCACTTCCATTTGATCTCGAGGCTGGTCATCAGATACTACCAAAGATAATACCCTGGAATTTTCCCTCAGAGTTATCCAAACTAATTGAGAAAGAAGTTGCCAAGTCAGTAATCGTAATGGAAGAAAACTCATGCTTGCAAGGGTTAGTTGAGGAAGAGCTTCACAAAAATGAAAAGAAAAACAATTTAGATGTACAATGTATGGGAACTGATTATTTAGAGGCCAAGGTAGAGGTGATGAGGAATAGATCTATTACAGACTGCAGTGAGTTTTGTCAATATAGTGCTATTTCTGAGTTTGCTAATTGTTCTGGATCCCCAGTAACATCCTTTTGGCAAAAGGGCCAAAGGAAACTTGTAGTGATGTCCTCTGAGTCTGAGGATAAGGATCCAAATAATGGACATTCACTAGAGGGTCATGATGAATCTTTCAAGAGACAATCCCTTGAAGGAAACAGTGTATCTTCCTGTAAGTTTCAATTGAATCATTGCTACACTAGTTCGTCATTTTGCAAGCTGGCTTGTTCTGGTTTGGAGGATTCAGAGGAACAGCCTAAATATTTAGGAACAGCTTATGATGCATGCTTAAATGAAACATGTAAATCATCTGGTATATCCAGTTTTCCAGAATCAATAATTGTTCCAGAGATTGCAATTCCAAATACAGTAGAGACAAAGTCTGGAGCAGTGTCTTCTGGCCATCTTGCTGGTCCAGTAGAAGTTTCTCTGGATAATGAGCTGACACCATTCACTTTCAGTGTTTGTCAGCACTTAGCAAGGTTGCCACAAAATTTGGATTCATCGGTGAATACTGAAATTCCAAAATCTTTTCCAAAAGCAGCTGTGCAAGTTTTTAGAGATGAGAACATGGAAACCACAACTGTGTATAACAAGATGAATGAGTGCAGTCATGCTGATTTTAAATTGAAGTTTGTTGAGTCCAGTCCATCTATGGAGATAGATATGGTGCAAAATTTGTGGAGGAAACTTCGTGATTGTCGAACGGATTTAAGACAGCACGCCACCTCAGAACAGCTAGGTGCTATTCAAGCTGTTAAACTTGCTAGTGGGATGACCAATCTAATTTCAGAAGCTGACTTCTTGTTTCGTAATCACCAACAAAAGCAATGTGGCATTATGGAACCTCCTATTTTCCTTTCTGATGAAGCCACATTTAGTTGGTATAATGAGCAAATGATGATGTCCACTGTTGCTGTACATGGTTTTTGTTTTTATGCCAAACATATATCAGATGTGGGATCAAAGTTGGGTTGTGAGAACAGGGTAGACATAACTACAGAGATGTTGGCTTCCACTAATAATATCATGGCACTGGGGAAGTTATCTAGACAGGAGCACACAAAAAGCATGAGTAACTGTTCTGAAAAGCAGTCAGAGCTGGAAACCCCAAGAAATAATATGAAGAGGAAATACAATGAAAACAAAACATCTCTATTCAATGTGATCCAGTCCATAGTTCCTACAAGATTATCATTGGCAATGAAAGGTGTTGCATTCAATGAATATCTATCTTCTCTACGCCAAATTTCAATTTCAGAAGGTTTCCGCATTACACATGGTGTTAAAAAGATGAGAAGAGGAAGGACGCGGGGTGCTGAACATTATTTGAGCAGAGGTTCAATGTTGTCTCCTGAAGATATATCATTGGTGTGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAGTACACCTCTAACATGGAAGCAAATGTACAAGATTAA 2874 0.3987 MMESAASRTVGTSFLGPLCEAWLANLFPDTEVFPCLMHFSMRSYYCSCDDKAEGSLWIHKYKPTKAFEVCGNDESLNFLRDWLRLWHERRDQNRKDSSNWDQRDMQDHDDVYSCSDGDYSSKDLNKEDSLQNVLLITGPVGSGKSAAVYACAQEQGFDVLELNASDCRNGTAVKQYFGDALGSHGCKRLLEHSVSSQKKTVMLPPAPALPNDKAVEEMDDGVIELITISNGGAHSPGGKSQRLHDKNNVFTCDSVQTLILVEDVDILFPEDRGCIAAIKHIAETAKGPIILTSNSNNGGLPDNFVRLHIPFSLPLRDELLCHLYMVCDAEEVNINPLLLEKFIKSCDGDIRKTIMHAQFWFQNKKYRKDRKVQTVYGSLPFDLEAGHQILPKIIPWNFPSELSKLIEKEVAKSVIVMEENSCLQGLVEEELHKNEKKNNLDVQCMGTDYLEAKVEVMRNRSITDCSEFCQYSAISEFANCSGSPVTSFWQKGQRKLVVMSSESEDKDPNNGHSLEGHDESFKRQSLEGNSVSSCKFQLNHCYTSSSFCKLACSGLEDSEEQPKYLGTAYDACLNETCKSSGISSFPESIIVPEIAIPNTVETKSGAVSSGHLAGPVEVSLDNELTPFTFSVCQHLARLPQNLDSSVNTEIPKSFPKAAVQVFRDENMETTTVYNKMNECSHADFKLKFVESSPSMEIDMVQNLWRKLRDCRTDLRQHATSEQLGAIQAVKLASGMTNLISEADFLFRNHQQKQCGIMEPPIFLSDEATFSWYNEQMMMSTVAVHGFCFYAKHISDVGSKLGCENRVDITTEMLASTNNIMALGKLSRQEHTKSMSNCSEKQSELETPRNNMKRKYNENKTSLFNVIQSIVPTRLSLAMKGVAFNEYLSSLRQISISEGFRITHGVKKMRRGRTRGAEHYLSRGSMLSPEDISLVCEGDLYRKISSQYTSNMEANVQD. 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02167 957 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 41 945 IPR004582 GO:0006281
Seca7g02167 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 373 IPR027417 -
Seca7g02167 957 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 316 377 - -
Seca7g02167 957 Gene3D - 54 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02167 Seca-Chr7 50674530 50684869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02167 57 168 Core DNA Replication Machinery Family AT5G22010 29.464 3.91e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02167 K26118 - gmx:100815984 1202.58