Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02158 ATGGGGAGAGCATTTCAATGGATTCTTCTGTTTTTAACAGCAAGTGCTTCATCAATCACCATTAATGTTGTGGGAAACGATGAACGGGCTGATAGGAAGCTTGCCAATATTGAATATTCAGGTGTGATAAGCATTGATTGTGGGGCAAATGAGGGCTACACTGATAAAATGACCAATATGCCGTATCAAGCAGATGATAACATGGTTGTCCAATTTGGTGAAATTCATAATGTATCCCCGGATTACACCTTTGACAATTTCAGTCAGATTGCAAAGCAACTGAGCACATTGAGAAGCTTTCCAGAAGGGGGGAGGAATTGCTACACCTTAAAACCCAAACAGGGAAAGAACAATAAATATCTCATGAGGGCTTACTTTGTATATGGAAACTATGACAACAAAAATGAACTGCCAATTTTTTATTTGCATATTGGTGTCAACGCATTCGCCAGACTAAGCCTAAATACAAATACGGCTTCTTACGTTAGTCGAATTGACGGTATTCATTTTATCTCAACAGACACAATCGACTACTGTCTTGTAAACAGTAACGATGGGGTACCTTTCATTTCATTATTGGAATTGTGGCCTTTGGACAATTCTGTTTATCAAACTTCCTCCACTTTACTGCCTCTAACTCTTGAGGCACGAGTCAACCTTGGAGCATCTGTAGACACTAATCTCTTCATCAGGTACACGGATGACATTTATGGTAGGTCTTGGTCCATACGAGAAAGTTTTAACAAGAACCCAAAGAAAACATCATCAGCCATTGATTTGGATAAACTTGATGACCCTTACAAACTGCCAGCAGAAGTTTTGAGTACTGCAGTTGAGGCGCTAAATTTGTCCAATTCTTTGAATTTCACAACGAATCTTAACACAGATTATGAGTATTATGTGTATCTTCATTTTTTTGACTTTGAGGATCGGGAAAATAATCAGAAAAGGATAATGGAAATTTCTATCAATGGTCTTGGTGATGCAGTCACACAACTCCTGATCACCCTTGCATATTGGAAGCCCAGGAGCATAGTGATACCTATAAAAAAAGGAATGGGCATTTCTAATATTTTGATTGAAGCTACCTCTCATTCCAACTTACCTGCCATGCTTAATGCTTTTGAGATTTTTAGTGTGGTACGTCAGCCTAATTCTGCCACTCAACAAGAAGATGTTGATACTATCCGAAAGATCAAAAAAATTTATAACATCTCCAAAATAAGTTGGCAAGGAGACCCATGCGGACCAATGAGTTTTACATGGGAAGGTTTGACTTGCAATGATGGGGACAATCCAAGAATCATTTCATTGAACTTAAGCTCAAGCAAATTGTCAGGCGAGATAGATGCTTCATTCTCCAATCTCACATATTTAGAGATTTTGGATTTATCAAACAACGAATTGACTGGGGAAGTGCCAGAATTTTTTGCAGAACTACCCCGATTGAAGATCCTTAATTTGTCAAGCAATAAACTCACAGGTTCCATTCCTGAGTCTCTAAAGGCGAAGTCAAATACCTCTTTGCAACTGAGCTTGGATGGAAATCTCGGCCTCAATCAAACAGTAGGCTCATACGAAAGCAACGACCACGAGTCCATTGTTCCATTAGTTGCATCAATAGTAGCCTCTGTTGCGGCCCTCATAATAGTGGTCATTGTTATGGTAATCTGGAGACTCAAAAAAAACGGAAGAGATTCTTCTAAGAAAGATGAGCAGCTGAAAACAAAAAATCAAGCATTTCATTACTCAGAAGTTCTTAGTATCACTAATAATTTCAATACAATGATTGGAAAAGGTGGATTTGGTAAGGTTTACCTAGGTATTCTACAGGGTGGCAAGAGAGTTGCCGTAAAAATACTTTCATTGTCATCAATGCAGGGGTATAAGGAGTTTAAGTCAGAGGCAAAATTATTGATGCTTGTGCATCATAGAAACGTAGTTTCTCTTGTGGGGTACTGTGATGAAGGTGACATTAAAGCACTTATATATGAATATCTCTCACGAGGGAACCTCCAGAAACAATTGTCAGGTATAACAACCCAAATATTTTGGAATGGAATGAAAGACTTAAAATTGCCTTGGATGCTGCAAATGTTATTTGAAATACAGGACTAG 2118 0.3843 MGRAFQWILLFLTASASSITINVVGNDERADRKLANIEYSGVISIDCGANEGYTDKMTNMPYQADDNMVVQFGEIHNVSPDYTFDNFSQIAKQLSTLRSFPEGGRNCYTLKPKQGKNNKYLMRAYFVYGNYDNKNELPIFYLHIGVNAFARLSLNTNTASYVSRIDGIHFISTDTIDYCLVNSNDGVPFISLLELWPLDNSVYQTSSTLLPLTLEARVNLGASVDTNLFIRYTDDIYGRSWSIRESFNKNPKKTSSAIDLDKLDDPYKLPAEVLSTAVEALNLSNSLNFTTNLNTDYEYYVYLHFFDFEDRENNQKRIMEISINGLGDAVTQLLITLAYWKPRSIVIPIKKGMGISNILIEATSHSNLPAMLNAFEIFSVVRQPNSATQQEDVDTIRKIKKIYNISKISWQGDPCGPMSFTWEGLTCNDGDNPRIISLNLSSSKLSGEIDASFSNLTYLEILDLSNNELTGEVPEFFAELPRLKILNLSSNKLTGSIPESLKAKSNTSLQLSLDGNLGLNQTVGSYESNDHESIVPLVASIVASVAALIIVVIVMVIWRLKKNGRDSSKKDEQLKTKNQAFHYSEVLSITNNFNTMIGKGGFGKVYLGILQGGKRVAVKILSLSSMQGYKEFKSEAKLLMLVHHRNVVSLVGYCDEGDIKALIYEYLSRGNLQKQLSGITTQIFWNGMKDLKLPWMLQMLFEIQD. 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02158 705 Pfam Protein tyrosine and serine/threonine kinase 593 698 IPR001245 GO:0004672|GO:0006468
Seca7g02158 705 FunFam Leucine-rich repeat receptor-like kinase 391 522 - -
Seca7g02158 705 FunFam Leucine-rich repeat receptor-like protein kinase 569 666 - -
Seca7g02158 705 ProSiteProfiles Leucine-rich repeat profile. 482 504 IPR001611 GO:0005515
Seca7g02158 705 Pfam Malectin-like domain 45 380 IPR024788 -
Seca7g02158 705 ProSiteProfiles Protein kinase domain profile. 591 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02158 705 SUPERFAMILY L domain-like 413 509 - -
Seca7g02158 705 Pfam Leucine rich repeat 437 493 IPR001611 GO:0005515
Seca7g02158 705 PANTHER OS07G0107800 PROTEIN-RELATED 43 681 - -
Seca7g02158 705 SUPERFAMILY Protein kinase-like (PK-like) 575 685 IPR011009 -
Seca7g02158 705 Gene3D - 214 347 - -
Seca7g02158 705 Gene3D Phosphorylase Kinase; domain 1 573 666 - -
Seca7g02158 705 PRINTS Leucine-rich repeat signature 459 472 - -
Seca7g02158 705 PRINTS Leucine-rich repeat signature 480 493 - -
Seca7g02158 705 Gene3D Ribonuclease Inhibitor 396 514 IPR032675 -
Seca7g02158 705 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02158 Seca-Chr7 50508665 50538307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02158 40 678 Receptor kinase-like Gene Family AT2G19210 39.302 8.41e-139 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca7g02158 Malectin_like 5.7e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02158 - - mtr:11437028 756.133