Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02150 ATGTTTTTTTGCAATGATTTTATTGCTGAAGTAGGAAGAAAGGTTATCTTCTGTGATCCTGCAAACAATGTAATTCACATGGTTGTACGTAGGATGGGTAGTAGTTTATACTTTTGTCATGGTTGGTATCTTTTGAAGGACATTTATGATATTGTTGAGGGAGCTTGGCTGAAACTTTATTTTCATAATGAGAATGAATTCCATTTAAGGGTTTATGATCGGAAAATGGTTGAAATTCTATATCCTCTTCCAGCAAAGGAATACAACCATGACCTGACCTTTTTGCCTGAGGATATAATTCCTGGGTATGTTCAACAAGATTTGGATTACATGCATTATTCTAAGAAGAGCTTGACAGAGTATACTGCTACTCACAATTTATTGAATCTTCCCAAAGATCTTTGCCAGAGATTTGTTGGAAACCCGTCTAATTGTGTTTTAAGGGATGATGACGGTGCTGACTTCCCAGTCTTTTTGTCATGGAACAAAAAGAACAACATTGCTTACATTACAAAAGGATGGAAGGAATTTTGCACAGCAAAGGGATTAAAGGCAGGGGAAACTCTTCGTTTGAGGATTAATCCCCAAGATTCATCAATTATTTTTGTTAAAAAAGTATTTTAA 624 0.3526 MFFCNDFIAEVGRKVIFCDPANNVIHMVVRRMGSSLYFCHGWYLLKDIYDIVEGAWLKLYFHNENEFHLRVYDRKMVEILYPLPAKEYNHDLTFLPEDIIPGYVQQDLDYMHYSKKSLTEYTATHNLLNLPKDLCQRFVGNPSNCVLRDDDGADFPVFLSWNKKNNIAYITKGWKEFCTAKGLKAGETLRLRINPQDSSIIFVKKVF. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02150 207 ProSiteProfiles B3 DNA-binding domain profile. 113 207 IPR003340 GO:0003677
Seca7g02150 207 CDD B3_DNA 115 202 IPR003340 GO:0003677
Seca7g02150 207 SMART B3_2 113 206 IPR003340 GO:0003677
Seca7g02150 207 Pfam B3 DNA binding domain 115 194 IPR003340 GO:0003677
Seca7g02150 207 Gene3D - 106 206 IPR015300 -
Seca7g02150 207 SUPERFAMILY DNA-binding pseudobarrel domain 112 194 IPR015300 -
Seca7g02150 207 SUPERFAMILY DNA-binding pseudobarrel domain 3 75 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02150 Seca-Chr7 50099958 50104767 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca7g02150 B3 3.9e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02150 - K05767 vun:114194236 52.7582