Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02145 ATGTATCCAAGTTCTTCTAAGAAAGATGAGCAGTTAAATTTGAAAAATCAAGCATTTACTTACTCGGAGGTTGTTAGTATCACTGATGATTTCAAAACAATGATTGGAAAAGGTGGATTTAGTAAGGTTTACCTAGGTACTCTACAAAGTGGCAGAAGAGTTGCTGTTAAATTACTTTCTTTATCACCAATGCAAGGGCATAAAGAGTTCGAGTTAGAGGCAAAATTGTTGATACTTGTTCATCATAAAAACGTGGTTTCTCTTGTGGGATATTGCGACGAAGGTGACACCAAAGCACTTATTTACGAATATCTCCCTGAGGGGAACCTCCAGCAACAATTGTCAGGTTTTTCAAGTCATATGCTTCAAAAAATCACCATATCATAA 387 0.3618 MYPSSSKKDEQLNLKNQAFTYSEVVSITDDFKTMIGKGGFSKVYLGTLQSGRRVAVKLLSLSPMQGHKEFELEAKLLILVHHKNVVSLVGYCDEGDTKALIYEYLPEGNLQQQLSGFSSHMLQKITIS. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02145 128 SUPERFAMILY Protein kinase-like (PK-like) 12 120 IPR011009 -
Seca7g02145 128 Gene3D Phosphorylase Kinase; domain 1 2 104 - -
Seca7g02145 128 PANTHER OS07G0107800 PROTEIN-RELATED 14 116 - -
Seca7g02145 128 ProSiteProfiles Protein kinase domain profile. 29 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02145 128 Pfam Protein tyrosine and serine/threonine kinase 31 116 IPR001245 GO:0004672|GO:0006468
Seca7g02145 128 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Seca7g02145 128 FunFam Leucine-rich repeat receptor-like protein kinase 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02145 Seca-Chr7 49809622 49810137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02145 15 116 Receptor kinase-like Gene Family AT3G21340 57.843 2.36e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca7g02145 PK_Tyr_Ser-Thr 6.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02145 - - vum:124820758 164.081