Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02145 | ATGTATCCAAGTTCTTCTAAGAAAGATGAGCAGTTAAATTTGAAAAATCAAGCATTTACTTACTCGGAGGTTGTTAGTATCACTGATGATTTCAAAACAATGATTGGAAAAGGTGGATTTAGTAAGGTTTACCTAGGTACTCTACAAAGTGGCAGAAGAGTTGCTGTTAAATTACTTTCTTTATCACCAATGCAAGGGCATAAAGAGTTCGAGTTAGAGGCAAAATTGTTGATACTTGTTCATCATAAAAACGTGGTTTCTCTTGTGGGATATTGCGACGAAGGTGACACCAAAGCACTTATTTACGAATATCTCCCTGAGGGGAACCTCCAGCAACAATTGTCAGGTTTTTCAAGTCATATGCTTCAAAAAATCACCATATCATAA | 387 | 0.3618 | MYPSSSKKDEQLNLKNQAFTYSEVVSITDDFKTMIGKGGFSKVYLGTLQSGRRVAVKLLSLSPMQGHKEFELEAKLLILVHHKNVVSLVGYCDEGDTKALIYEYLPEGNLQQQLSGFSSHMLQKITIS. | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02145 | 128 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 120 | IPR011009 | - | |
Seca7g02145 | 128 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 104 | - | - | |
Seca7g02145 | 128 | PANTHER | OS07G0107800 PROTEIN-RELATED | 14 | 116 | - | - | |
Seca7g02145 | 128 | ProSiteProfiles | Protein kinase domain profile. | 29 | 128 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02145 | 128 | Pfam | Protein tyrosine and serine/threonine kinase | 31 | 116 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g02145 | 128 | ProSitePatterns | Protein kinases ATP-binding region signature. | 35 | 57 | IPR017441 | GO:0005524 | |
Seca7g02145 | 128 | FunFam | Leucine-rich repeat receptor-like protein kinase | 6 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02145 | Seca-Chr7 | 49809622 | 49810137 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02145 | 15 | 116 | Receptor kinase-like Gene Family | AT3G21340 | 57.843 | 2.36e-36 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Seca7g02145 | PK_Tyr_Ser-Thr | 6.8e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02145 | - | - | vum:124820758 | 164.081 |