Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02141 ATGGATGAGAAAGCCGAGAAGAAAAGGTCTAAGATTGACAGAAGCAATTTGGCAAGTGGTTTTCATATGGATTCAAATAAAGGAAAGAAAAAGAAGCACAAGGACAGAAAGACAAAGCATGCAACTGATAAAATACTTAATTCAAATGAAACCCTTGAAGAAAATTGTACTGGTGAAGCGGCTGACAAACAATCTTGCTCTATTGAAGGTAAAGAATTGCAGTTCTTGGATGAGAACCAACAACTCAAGATGAAGAAAAGAAAGAAGTATGATGATTCATTAACTGGAAAGCAAAAATTGGGTTTTTCAATACCGAGCGAAAAAGGCAAAATGACAAAGGATAATAATGAGTTCAAAAGCAATGGAGGTGATAATGAGTTTAGAAATGATGAATGTGAGGATGGTGACCAAGGCAAGAAGATGAAGAAGAAACTGAGTGATGAAAGCAAAAGTAAGGAGAACAGTGTTTTTAATAGGAATGGAGATGATCCACCTTTTGCTAGGGTTGAGCCAGGAGATGCCAATGCTCGTTCTGTTGTCACTGAAGTTAATGATCAAGGCAAGGAAATGAAGAAAGAAAAGACAACTAAGGCAGGTACTGGTGAATCTCCTAACCCTGCACGTGATGGAACATCCAAACCCAAACGAGTAACTTTTTCTGATCAAGTGGATGTTTGTTGTGATGGCTTAGTGCGTGGGAAAAGGTTTACACGAGAAGAAGATGAGAAGATCAAAGCGGCTGTCATTGACTATATAGAGTTTCATGGTTTGGGAGACGAAGGTCTAGATATGGTTCTCCATTGCAAGAAACATCCTGAAGTTAGGGATTGTTGGAAGGAAATTGGAGAAGCCTTACCTAATAGACCTCAAGTAAGTGTGTATTATCGTGCTCATATTTTGTTTGAAAGGGATGAGAGGCGTAAGTGGACTCGTGATGAGCTTGAATTTGTACAGAAGGTCCAGGAACAACATGGATCTGATTGGAAATTGGTAGCTGAAGCTTTGGATAAAAGTCGAGTTCATGTAAAGGATGCATGGCGTAGAATAAAATTAACCAATATAAAAAGAGGACGGTGGACACAAGAGGAGATTCAAAATTTATTTGATTTAGTAAATCTGGATCTATGTGCGAGGGCTTCAGAAGGCTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTAGTTGGGAGGCAATTGGTAGCAAATTGGCCACTAGAACCAGTCAAGTGTGCTGCAAAAAGTGGTATGAGAAATTAGCACCACCTATGGTTTCTAAGGGTGAGTGGTCGGACACTGATGACTACCGTTTGGTTACTGCTTTATATGTTTTGGATGCTTGCTGCATGGAGGAGGTAGACTGGGAAAGTCTGCTTGAGCATAGGTCTGGTGATATATGCAGAAAACGATGGAACCAAATGGTCCAACAAATTGGAGAGTATGGAGGGAAGCCATTTGCTGAGCAGGTTGAAATTCTTTCCAAGAGATATTCCCCTGACTTATTGGAAGCAAGAGAGGCCTTTGATAACAAACCTGTGGTTTGTTGA 1548 0.3979 MDEKAEKKRSKIDRSNLASGFHMDSNKGKKKKHKDRKTKHATDKILNSNETLEENCTGEAADKQSCSIEGKELQFLDENQQLKMKKRKKYDDSLTGKQKLGFSIPSEKGKMTKDNNEFKSNGGDNEFRNDECEDGDQGKKMKKKLSDESKSKENSVFNRNGDDPPFARVEPGDANARSVVTEVNDQGKEMKKEKTTKAGTGESPNPARDGTSKPKRVTFSDQVDVCCDGLVRGKRFTREEDEKIKAAVIDYIEFHGLGDEGLDMVLHCKKHPEVRDCWKEIGEALPNRPQVSVYYRAHILFERDERRKWTRDELEFVQKVQEQHGSDWKLVAEALDKSRVHVKDAWRRIKLTNIKRGRWTQEEIQNLFDLVNLDLCARASEGYRKSKHGMLRDNISWEAIGSKLATRTSQVCCKKWYEKLAPPMVSKGEWSDTDDYRLVTALYVLDACCMEEVDWESLLEHRSGDICRKRWNQMVQQIGEYGGKPFAEQVEILSKRYSPDLLEAREAFDNKPVVC. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02141 515 ProSiteProfiles Myb-like domain profile. 351 420 IPR001005 -
Seca7g02141 515 CDD SANT 358 420 IPR001005 -
Seca7g02141 515 MobiDBLite consensus disorder prediction 1 15 - -
Seca7g02141 515 PANTHER GB|AAC33480.1 4 514 - -
Seca7g02141 515 ProSiteProfiles Myb-like domain profile. 422 475 IPR001005 -
Seca7g02141 515 Gene3D - 310 348 - -
Seca7g02141 515 Gene3D - 349 424 - -
Seca7g02141 515 SUPERFAMILY Homeodomain-like 306 365 IPR009057 -
Seca7g02141 515 ProSiteProfiles Myb-like domain profile. 301 350 IPR001005 -
Seca7g02141 515 MobiDBLite consensus disorder prediction 1 46 - -
Seca7g02141 515 MobiDBLite consensus disorder prediction 84 215 - -
Seca7g02141 515 MobiDBLite consensus disorder prediction 184 198 - -
Seca7g02141 515 Pfam Myb-like DNA-binding domain 309 367 - -
Seca7g02141 515 SMART sant 426 477 IPR001005 -
Seca7g02141 515 SMART sant 355 422 IPR001005 -
Seca7g02141 515 SMART sant 305 352 IPR001005 -
Seca7g02141 515 SMART sant 232 303 IPR001005 -
Seca7g02141 515 SUPERFAMILY Homeodomain-like 400 477 IPR009057 -
Seca7g02141 515 MobiDBLite consensus disorder prediction 110 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02141 Seca-Chr7 49665558 49667288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02141 303 477 MYB Transcription Factor Family AT4G32730 24.859 9.09e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02141 Myb_DNA-bind_6 9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02141 - - aprc:113872850 679.863