Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02132 ATGCCAGTGAACCGTGGCCAAGGCCAACCCACAAGGTGGTATCAACTATGCTTTGCTCCCATTAGTGTAGATAGTTCAGATGATTCAGATACAGAATCTGTAGTCTTACCTCCAAGCACTCCAACTCCAACTAGTACATGGCAAGAACTTTCTCCACCACAAACTTACAGGCATTTTCCACCATCACCACCACTGCCACCACTACCGCCGTCACCACCACTGTCACCACTACTACCGCCGCCGCCGCCACCTTTTCTAGTGGGGCAGGCTTGGATAACACTATCTGACATTGAATCACAGCATGACATAAATCAACCTCCCAATCCAAGTCAAGCATTTGTTGATCATAGCACACTTGGTTTCTCTTCTGTGTTTGAGCAAGAAAGGCCTGAAATTGATCAAAGTGACTTACTCCTTCAGGTACCAGAAGGTCTCATTAATGCCATTCAAAGTGTGAGAATCTCAGAGCTGCATCAGAGGGAAGATAATCTGTCTCACTGTCCCATTTGCATGGAGGAGTTTAAAATTGGTGATCAAGCATGTCAGTTACCCTGCAGACATATCTACCGTTCTGAATGCATCCTTCGTTGGCTTAAAAACAATAAAACATGCCCTGTTTGCAGGCTTCAATTGGATGGTTGGGAAGGTCAAGGTGGTTCTGATAGCATAGATGGTAATAGTTTGAACCTTGAACTTGAAATCCCACCACCTCAATATCCTGCTGATAATTGGGAATTATTTTTTCCACCCATTCTGGATTCACATGTTACAGAAAGTAGTGCACATGTATCTTACTATTCTGACTATGATAGTGCATGTGATGAATTTGGTGGTGATTCTCATGAAGATGGAGATATAATTGGTGCTACTCAGAGTAGTCGTGGTTCACGAGTTTATCCATTAGAGTAG 909 0.4356 MPVNRGQGQPTRWYQLCFAPISVDSSDDSDTESVVLPPSTPTPTSTWQELSPPQTYRHFPPSPPLPPLPPSPPLSPLLPPPPPPFLVGQAWITLSDIESQHDINQPPNPSQAFVDHSTLGFSSVFEQERPEIDQSDLLLQVPEGLINAIQSVRISELHQREDNLSHCPICMEEFKIGDQACQLPCRHIYRSECILRWLKNNKTCPVCRLQLDGWEGQGGSDSIDGNSLNLELEIPPPQYPADNWELFFPPILDSHVTESSAHVSYYSDYDSACDEFGGDSHEDGDIIGATQSSRGSRVYPLE. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02132 302 ProSiteProfiles Zinc finger RING-type profile. 167 208 IPR001841 -
Seca7g02132 302 MobiDBLite consensus disorder prediction 56 80 - -
Seca7g02132 302 MobiDBLite consensus disorder prediction 24 80 - -
Seca7g02132 302 CDD RING-H2_PA-TM-RING 166 208 - -
Seca7g02132 302 Pfam Ring finger domain 166 208 IPR001841 -
Seca7g02132 302 SMART ring_2 167 207 IPR001841 -
Seca7g02132 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 128 211 - -
Seca7g02132 302 MobiDBLite consensus disorder prediction 24 55 - -
Seca7g02132 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 213 IPR013083 -
Seca7g02132 302 SUPERFAMILY RING/U-box 145 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02132 Seca-Chr7 49522549 49523457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02132 97 213 C3H Transcription Factor Family AT3G63530 31.933 5.30e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02132 - K11982 cam:101501744 234.958