Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02125 ATGAACATGGAGATTGACATGGACACGCTCATGGATGATGTCCCTGATCTCGATTTCTCCAGCTATAGCACCACCACCCCTACTTCCGACGACGACGCTGCCTGTAACTGGACCCCCTGGTCCCCACTCGTCGACTGGGACTCCTTCACCGCCGGCCAAGACAACTTCCACGACCTCATCGAATCCTTCATGGAAGACAACCTCGCCACCGGCGTCCTCACTCCCGAACAGGCCGCCACAGAAGATGAATCAACCGGAGACGGTTGCAACTCTGCTTCCACGACGGAGGACGATGACGGAGATAACCAGAAGGGCCTCCGCCTGGTGCACCTCCTGATGGCGGCGGCGGAGGCCCTCACCGGCGCCAACAAGAGCCATGACTTGGCTCGAGCGATATTGGTTCGGCTCAAGGAATTGGTGTCCCCAACCAACGGCACCAATATGGAGAGGCTCGCGGCGTATTTTACCGAAGCTCTCCAAGGTCTGCTAGATGGCGCGGTGGGTGCGCACACCACAACCCCTAAGGGTTACGTCATCGGTGGTCCCAATCATGAGGACCAACTAACGGACTTGCTGGCAGCCTATCAGCTTCTTCAGGACATGTCACCTTATGTTAAGTTCGGCCACTTCACTGCCAATCAGGCCATCCTTGAGGCCGTGGCCCACGAGCGAAGGGTCCACATCGTTGATTATGACGTCATGGAAGGGGCCCAATGGGCTTCACTCATGCAGGCCTTCGCTTCCAAGAAGGACGGCTCGCCGGGCCCGCACCTCCGCATCACTGCATTGTCCAGAAGCTGCAGCCGTGGCAGTGGACGGAGATCCATCGCTACGGTACAAGAAACTGGACGAAGATTAACGGCGTTTGCAGCTTCCCTCGGACAGCCGTTTACATTTCATCAGTGCAGGTTGGACCCGGATGAAACGTTTCGTCCGTCTTCTCTGAAGCTGGTTCGCGGTGAGGCTTTGGTGTTCAACTGTATGCTGCACTTGCCTCACCTCAGCTACCGGGCCCCCGATTCGGTTGCTTCGTTCTTGAACGGTGCGAAGGAGTTAAGCCCGAGGCTTGTGACTTTGGTGGAGGAGGAAGTGGGGCCCCTTGGAGATGAGGGCTTTGTCGGCTTGTTCATGGATTCGCTGCACCGTTACTCGGCGGTTTATGATTCGCTTGAGGCTGGGTTTCCCATGCAGAGATGGGCTCGGGGTTTGGTGGAGCGAGTGTTCTTGGGCCCACGAATAACAGGCTCCGTGGCCCGGTTATACCGGACAGGAGAGGAGGAAGAAAGAGGGTCGTGGGGGGAGTTATTGGGTGCGTGCGGGTTCAGGGGAGTTCCCATAAGCTTTGCTAACCATTGCCAAGCGAAGCTGTTGCTGGGTTTGTTTAACGATGGGTATAGGGTGGAGGAGGTGGGTAACAATAAGTTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCGGCATCTGTTTGGACTTCTGTTTCAGAAACTGATTAA 1494 0.5622 MNMEIDMDTLMDDVPDLDFSSYSTTTPTSDDDAACNWTPWSPLVDWDSFTAGQDNFHDLIESFMEDNLATGVLTPEQAATEDESTGDGCNSASTTEDDDGDNQKGLRLVHLLMAAAEALTGANKSHDLARAILVRLKELVSPTNGTNMERLAAYFTEALQGLLDGAVGAHTTTPKGYVIGGPNHEDQLTDLLAAYQLLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDVMEGAQWASLMQAFASKKDGSPGPHLRITALSRSCSRGSGRRSIATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVASFLNGAKELSPRLVTLVEEEVGPLGDEGFVGLFMDSLHRYSAVYDSLEAGFPMQRWARGLVERVFLGPRITGSVARLYRTGEEEERGSWGELLGACGFRGVPISFANHCQAKLLLGLFNDGYRVEEVGNNKLVLGWKSRRLLSASVWTSVSETD. 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02125 497 ProSiteProfiles GRAS family profile. 99 491 IPR005202 -
Seca7g02125 497 MobiDBLite consensus disorder prediction 78 102 - -
Seca7g02125 497 MobiDBLite consensus disorder prediction 78 96 - -
Seca7g02125 497 Pfam GRAS domain family 108 491 IPR005202 -
Seca7g02125 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02125 Seca-Chr7 49191264 49192757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02125 116 494 GRAS Transcription Factor Family AT3G54220 35.938 9.96e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca7g02125 GRAS 1.5e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02125 - - egr:104431927 676.781