Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02107 ATGATCTCCCTAACCAACAACAATTATTGGGAGAATGGAATCCTTCCCTATGAAACCAAGGAGAAGAAGGATGCAACCACATCGTTTAACTCTGAGGAACTAAAGGAAAGGCCATTTGGCGCTAAGAACAAGCCTAAGCCACCCATCCTAATTAAGGAAGATAGTAATCAATATCTCATTCTAATCATTATTGAAAGTCGTGCTAGAAAGGAAATTGCTAAGGCCATAATCAAGTCCGCTTGTCATCGTCACGATGACATTATAGTGCAAAGTGGTTCGAATTTTGCCTCAAACAATGACTCCTCAGAGAGTCTTGCTATTCACTATGATAAAAACATTTCCACAAGTGATGCTAGAAGAAGAGATAATATGATCTCCATCACCAACAACAATTACGGGGATCATGGAATCCTTCCCTGTGAAACGAAGGAGAAGAAGGATGCAACCACATCGTTTAACTCTATGGAACCAAAGGAAAGGCCATTTGGCTCAAAGAACAAGCCTAAGCCACCCATCCCAATTAAGGAAGATAGCAATCAATATCTCAAATAA 552 0.4004 MISLTNNNYWENGILPYETKEKKDATTSFNSEELKERPFGAKNKPKPPILIKEDSNQYLILIIIESRARKEIAKAIIKSACHRHDDIIVQSGSNFASNNDSSESLAIHYDKNISTSDARRRDNMISITNNNYGDHGILPCETKEKKDATTSFNSMEPKERPFGSKNKPKPPIPIKEDSNQYLK. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02107 183 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 98 IPR014476 GO:0003680
Seca7g02107 183 MobiDBLite consensus disorder prediction 142 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02107 Seca-Chr7 48360363 48364086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02107 35 98 AT-hook Motif Nuclear Localized (AHL) Family AT4G35390 34.375 2.60e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02107 - - cave:132164508 58.9214